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Information for unigene UN23530
| FASTA Sequence |
| Unigene ID: UN23530 | Length: 981 |
| SNP | GTCTCATGGAGAGTTCGATCCTGGCTCAGGATGAACGCTGGCGGCATGCTTAACACGTGCAAGTCGGACGGGAAGTGGTGTTTCCA
GTGGCGGACGGGTGAGTAACGCGTAAGAACCTGCCCTTGGGAGGGGAACAACAGCTGGAAACGGCTGCTAATACCCCGTAGGCTGA
GGAGCAAAAGGAGGAATCCGCCCGAGGAGGGGCTCGCGTCTGATTAGCTAGTTGGTGAGGCAATAGCTTACCAAGACGATGATCCT
TGGCTAAATCATTTTAAAGACTTATCAGAAGAAAAAAATCAGGTAAAATCAAAAATAAGAAGACTGGTTGCAGAAGAAAATATAAG
TTTTTTTTTTGCTTTCACGTAAGAGTCAAAGAAAATGGCGAGCACTGTGATGACTACACTGCCTCAGTTCAATGGTCTTCGAGCTA
GCAAGATCTCTGCAGCTCCAGTGCAAGGCCTGGCAACTGTTGTGCCCATGAGACGCAAGGGAAATGGAGCTTTGGGTGCAAAGTGT
GACTTCATCGGTTCATCAACAAATCTGATAATGGTAACGTCGACGACTCTGATGCTGTTCGCTGGGAGATTCGGACTAGCACCATC
AGCCAACAGGAAGGCGACAGCTGGACTTAAGTTAGAGGCACGTGACTCGGGTCTACAAACGGGTGACCCAGCCGGGTTCACTCTCG
CCGACACTTTGGCTTGTGGTACCGTTGGTCATATCATCGGCGTCGGAGTTGTCCTTGGTCTCAAAAACATTGGTGCTATTTAAAAA
CATGTTCATTTGTATTCTGTCAACTTGTAGATTTAAAAAAACAAAGTTCTCAAGAACCCGAGGGGAGATCTAGTCAATGTTTATAA
TGTTTCTTATCGCATTGTATTCCTCTTTAAAACAACTAGAACGACCGCATCTTCAAGTATGTAACGTGAACCGAAGGCATTGTTCC
CTTGATGATAATATTTAATAGATCACATGAGTCAT
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| GenBank top hits (Blast detail) | Score | e value |
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| ABB97030 unknown [Brassica rapa] | 647 | 2e-065 |
| NP_174327 photosystem I reaction center subunit psaK [Arabidopsis thaliana] | 628 | 4e-063 |
| CAB53033 photosystem I subunit X precursor [Arabidopsis thaliana] | 624 | 1e-062 |
| AAM63834 Photosystem I reaction center subunit X, chloroplast precursor (PSI-K) [Arabidopsis thaliana] | 624 | 1e-062 |
| XP_002890866 photosystem I reaction center subunit X psaK [Arabidopsis lyrata subsp. lyrata] | 613 | 2e-061 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
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| Q9SUI5 Photosystem I reaction center subunit psaK, chloroplastic | 628 | 2e-064 |
| Q9ZT05 Photosystem I reaction center subunit psaK, chloroplastic | 510 | 8e-051 |
| P36886 Photosystem I reaction center subunit psaK, chloroplastic | 440 | 1e-042 |
| P14225 Photosystem I reaction center subunit psaK, chloroplastic | 253 | 5e-021 |
| P42051 Photosystem I reaction center subunit psaK, chloroplastic (Fragment) | 136 | 2e-007 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q2V611 Putative uncharacterized protein | 647 | 2e-065 |
| Q8LC56 Photosystem I reaction center subunit X, chloroplast (PSI-K) | 624 | 7e-063 |
| Q84QE6 Photosystem I reaction center subunit X psaK | 564 | 7e-056 |
| A5CAM0 Putative uncharacterized protein | 557 | 4e-055 |
| Q5EEQ1 Photosystem I reaction center subunit X PSI-K | 556 | 6e-055 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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