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Information for unigene UN23534

FASTA Sequence
Unigene ID: UN23534Length: 928  SNP
CAAAAGTAAAGAATGGACGACAATGAGATTTATAAATTCAGGGCTCAAATTATGAAATTATTACAAACCCACCCTCAAATCGTAAC
CATGTCTCTAGTTTGCCACATATTCCTTTGGAGTTTAAAAGTAATAATCGGGTAACAAGTCAACAAATATTATACAGAATCCGGGA
AGGCCTCACATTTTTCGAAGGTTGTCCAACCTTGCCTGAAGATCACTATCTATTCCCCCACCGTCCTCAGCTCCTGCCGCCTCAGC
TTGCACCACCTTATTCTTTCTGCTGGTGCTGCCACCGCACCAGATGGAGCATTCACCAGCTCTTGGTTGATATCGATACCGATCTC
GTCAAGGACTTGGCTAACAAGATCTTCAGTCTCTTCCTCTTCCTCATCTCCTTCCAAGGCATCATCAATAGCATCTCCCATCACCT
CAGAGGTCATCTCCATTTTCTCGTTTTGCCTCTCAAACTCTTGCATGATTTTCTGCAGAGAAGGCAGATTCATCTGCCTGTTCATT
TGCCCCATTGCTTTAGTCACACCTTTCATTGCCTCTCCCATTGCTTGTGTTGATTTGAGAGTCTGGATCCTGAGAGAAACACCTTG
GAGCTGGGATTTAAGCTTGTAAAACTTCTCAATCTGGTGTCGTGTTCTGATAAGGTCCTTTGCCATCACTTTCACAGCTCCCATCT
GTCCCTGCTTCGCGGTCTTTTTAATCTCGGTAATAAGTTTCTTCTCTTGTGTCTGAAGGCCTTGTCTCTCCCTCTCAATGTCTCTG
ATCGACTTATCAAGCATCCTCTTGTTTTCCCGCAGTAGTTCTGCAGGAGTTTTTCGCTTTCCGAAGATGGAATTCATCATGATCGC
AAGAAGAATCTCAAAACTTTGCACGGAAAATTTAAAGCTGAATTCCAATCAGCAGAACCTTCGATTGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_565336 vacuolar protein sorting-associated protein 2-1 [Arabidopsis thaliana]9277e-098
AAM67006 unknown [Arabidopsis thaliana]9223e-097
XP_002514068 Charged multivesicular body protein 2a, putative [Ricinus communis]8963e-094
XP_002330482 predicted protein [Populus trichocarpa]8936e-094
ACJ84123 unknown [Medicago truncatula]8839e-093

Swiss-Prot top hits (Blast detail)Scoree value
Q9SKI2 Vacuolar protein sorting-associated protein 2 homolog 19273e-099
Q54DB1 Charged multivesicular body protein 2a homolog 26111e-062
O43633 Charged multivesicular body protein 2a5904e-060
Q9DB34 Charged multivesicular body protein 2a5904e-060
Q7ZW25 Charged multivesicular body protein 2a5878e-060

TrEMBL top hits (Blast detail)Scoree value
B9RK24 Charged multivesicular body protein 2a, putative8962e-094
B9N5E3 Predicted protein8934e-094
B7FH94 Putative uncharacterized protein8836e-093
A5AFU2 Putative uncharacterized protein8764e-092
B9GKV8 Predicted protein8702e-091

Arabidopsis top hits (Blast detail)Scoree value
AT2G06530.1 VPS2.19273e-100
AT1G03950.1 VPS2.3 (VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 2.3)4514e-045
AT5G44560.1 VPS2.24246e-042
AT5G44560.2 VPS2.23824e-037
AT5G22950.1 VPS24.12411e-020

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
66  32%
 
117  37%
 
71  5%
 
94  21%
 
81  5%

Unigene MembersMember information