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Information for unigene UN23534
FASTA Sequence |
Unigene ID: UN23534 | Length: 928 |
| SNP | CAAAAGTAAAGAATGGACGACAATGAGATTTATAAATTCAGGGCTCAAATTATGAAATTATTACAAACCCACCCTCAAATCGTAAC
CATGTCTCTAGTTTGCCACATATTCCTTTGGAGTTTAAAAGTAATAATCGGGTAACAAGTCAACAAATATTATACAGAATCCGGGA
AGGCCTCACATTTTTCGAAGGTTGTCCAACCTTGCCTGAAGATCACTATCTATTCCCCCACCGTCCTCAGCTCCTGCCGCCTCAGC
TTGCACCACCTTATTCTTTCTGCTGGTGCTGCCACCGCACCAGATGGAGCATTCACCAGCTCTTGGTTGATATCGATACCGATCTC
GTCAAGGACTTGGCTAACAAGATCTTCAGTCTCTTCCTCTTCCTCATCTCCTTCCAAGGCATCATCAATAGCATCTCCCATCACCT
CAGAGGTCATCTCCATTTTCTCGTTTTGCCTCTCAAACTCTTGCATGATTTTCTGCAGAGAAGGCAGATTCATCTGCCTGTTCATT
TGCCCCATTGCTTTAGTCACACCTTTCATTGCCTCTCCCATTGCTTGTGTTGATTTGAGAGTCTGGATCCTGAGAGAAACACCTTG
GAGCTGGGATTTAAGCTTGTAAAACTTCTCAATCTGGTGTCGTGTTCTGATAAGGTCCTTTGCCATCACTTTCACAGCTCCCATCT
GTCCCTGCTTCGCGGTCTTTTTAATCTCGGTAATAAGTTTCTTCTCTTGTGTCTGAAGGCCTTGTCTCTCCCTCTCAATGTCTCTG
ATCGACTTATCAAGCATCCTCTTGTTTTCCCGCAGTAGTTCTGCAGGAGTTTTTCGCTTTCCGAAGATGGAATTCATCATGATCGC
AAGAAGAATCTCAAAACTTTGCACGGAAAATTTAAAGCTGAATTCCAATCAGCAGAACCTTCGATTGG
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GenBank top hits (Blast detail) | Score | e value |
NP_565336 vacuolar protein sorting-associated protein 2-1 [Arabidopsis thaliana] | 927 | 7e-098 |
AAM67006 unknown [Arabidopsis thaliana] | 922 | 3e-097 |
XP_002514068 Charged multivesicular body protein 2a, putative [Ricinus communis] | 896 | 3e-094 |
XP_002330482 predicted protein [Populus trichocarpa] | 893 | 6e-094 |
ACJ84123 unknown [Medicago truncatula] | 883 | 9e-093 |
Swiss-Prot top hits (Blast detail) | Score | e value |
Q9SKI2 Vacuolar protein sorting-associated protein 2 homolog 1 | 927 | 3e-099 |
Q54DB1 Charged multivesicular body protein 2a homolog 2 | 611 | 1e-062 |
O43633 Charged multivesicular body protein 2a | 590 | 4e-060 |
Q9DB34 Charged multivesicular body protein 2a | 590 | 4e-060 |
Q7ZW25 Charged multivesicular body protein 2a | 587 | 8e-060 |
TrEMBL top hits (Blast detail) | Score | e value |
B9RK24 Charged multivesicular body protein 2a, putative | 896 | 2e-094 |
B9N5E3 Predicted protein | 893 | 4e-094 |
B7FH94 Putative uncharacterized protein | 883 | 6e-093 |
A5AFU2 Putative uncharacterized protein | 876 | 4e-092 |
B9GKV8 Predicted protein | 870 | 2e-091 |
EST library breakdown for ESTs in the assembly |
Library |
ESTs | Percentage of ESTs in assembly |
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