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Information for unigene UN23536

FASTA Sequence
Unigene ID: UN23536Length: 1118 SSR 
GGAAAACCGGAAAAATATCGTAAAGCGGCAGCTTAGGGTTATTTGCACCTCTTCACCATGGACAAGGACGCTAGCGTGAGATCAGG
GTTCGAGAGTGAGGCTGCTGGAGAGGAAATTGTCGAGAATAACAGATGCAAGCCCCATACTGTGATTTCTGTGGAGGGATACGACA
CTAGTCTGCCTGAGGACGATATCAAGAGTGAATTGATTAATCACTTCAAATCATGTGGCGAAGTCTTTAATGTTATTCTTCGCGAA
GACCCAGATAGCCCTAATCTCGACAGACGTGCTTTGGTTATTCTTCTCGGAGAAGGCGCGGAAGAGAAGGCCTTGCAACTCAATGG
AACTGACATTGGTGGATGGAAGGCTCTTGTTAAAGTTGAACCAGAGGAGGAAGAAGACGAGGAGACACAACGTTATAAATCCTTTC
TGATTGACGAACTAACGAATGACCGCAGATTTTGGTATGGCGTTACCGTAAGGGGATATAACACTTCCCTTCCTGCAGATGAAGTA
AAGACTTGTTTGAAACACCACTTCTCTTCTTGTGGAGATATCACCCATGTTTTTGTCTCTACTCTCGAAAAGATTACTAATATCTA
TTTTCACCAAGAAGAAGGAGAAGCTAAGGCGCTGGATCTTTCTGGAAGTGAAGTGGGAGGATTCAAAATAGATGTTGAGCGCGTAG
CTACAATCTTTACTAACTGTCCCCCTCCCTTTCCCTCTTCCTCTCCCTCCGATGAAATTTATTACGGCTACTGTATCCCAGCTCAT
ATGATTGAGTTTTCCGGCGTGATCGAGGACAAGGTCGCTGCTTTTAAGAAGCAGAGGATTTCTATCTAGAAATCTCTCTCTCTCTC
TCTCAAGAAGCTCAATCTTTGGTGCTTAATAATTAATAAATCTTGTCAGATTATACAATGCAATGCAACCTTGGGGCTTTCTTATT
TATGTTTAATGTCAGAGCTCATTATGTATGTATGATGAGCCGTTTTAGTGTGTCTGGATGATAAACGTACTCTTAATAATTTCCTT
TTATTATTAACTCTCTACGAATTCGATTTGATTAGGTAGACAGTAGCATTGAGACTCGCAATTAAAATATTCACAGTGTTGGAATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002873094 predicted protein [Arabidopsis lyrata subsp. lyrata]3103e-026
XP_002883446 predicted protein [Arabidopsis lyrata subsp. lyrata]3077e-026
XP_002893783 predicted protein [Arabidopsis lyrata subsp. lyrata]2907e-024
XP_002871038 predicted protein [Arabidopsis lyrata subsp. lyrata]2782e-022
NP_195968 RNA-binding (RRM/RBD/RNP motifs) family protein [Arabidopsis thaliana]2602e-020

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LZD9 Putative uncharacterized protein F12E4_2502601e-020
Q67YA0 Putative uncharacterized protein At5g035001892e-012
Q9S755 MZB10.19 protein1768e-011
Q5BPG8 Putative uncharacterized protein1751e-010
Q5XUZ6 Putative uncharacterized protein1751e-010

Arabidopsis top hits (Blast detail)Scoree value
AT5G03480.1 nucleic acid binding / nucleotide binding2608e-023
AT5G03495.1 nucleotide binding1891e-014
AT3G09160.1 RNA recognition motif (RRM)-containing protein1764e-013
AT5G53700.1 INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: nucleic acid binding / nucleotide binding (TAIR:AT5G03480.1); Has 74 Blast hits to 54 proteins in 11 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 68; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink).1756e-013
AT1G48920.1 ATNUC-L1; nucleic acid binding / nucleotide binding1666e-012

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
116  26%
 
108  35%
 
122  9%
 
84  17%
 
72  9%
 
201  4%

Unigene MembersMember information