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Information for unigene UN23559

FASTA Sequence
Unigene ID: UN23559Length: 787  SNP
GGATCATAGCATCTCCTCTCAAACAAAACTAACAATTTTTGTTTTCACCCCAACAACTAATATTACAAATTTATAAAGTCCCCAAA
CGTAAGAGAGGAGAATATTACTCTAAGACTAATAATGGCCAAATTCTTCATCGTCTTCCTTGCCTCTGCCCTATGTTTCACCACCC
TTCTTCACTTTGCCGCCGCTGATGCCGACGACTTGGACCGTTTCCACATCAAAGGATCCGTCTACTGCGATACCTGCCGTGTCCAA
TTCATGACCCGCCTCAGTAAAGTCCTCGAAGGGGCAAAGGTAAAGCTTGAGTGCAAGGGTCGTGAGAACCAGACAGTGACACTGAC
GAAAGAAGCCGTGACCGACAAAGACGGAAAGTACGAGATGGTAGTTATGGGAGACCACGAAGAGGAAGTGTGTGAGATCATCCTCG
AGGAATCACCGGACGCAGAGTGCAGCGAGGTGAACAACCAAGAGTTCCTAAGAAACGCAGCCAGGATCAGTCTTACGGCGAATGAT
GGCATTGTCTCTAACGAGGTTCGAACCATTAACCCACTTGGGTTCATGAGGAAGACTTCTCTCGCTGATTGTCCTCTAGTTTTCAA
GGAGCTCGGAATCGTCCCTGACGTCATCTTCTAAGCTTTATTATATATATTTTACCTACATATGCACCGATCTGTCAACAATTTTT
AATTTCTTGTTAACTCTTTTTCAACATATTATATAAAACTTTTTTTCTTGAAGTTGTCGTCTGAGTTTACTTAACTGATGGTGTTT
TCTTTCGTTTTCT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_174209 pollen Ole e 1 allergen and extensin family protein [Arabidopsis thaliana]7798e-081
XP_002890794 hypothetical protein ARALYDRAFT_336019 [Arabidopsis lyrata subsp. lyrata]7143e-073
AAM65838 Ole e I (main olive allergen)-like protein [Arabidopsis thaliana]6426e-065
XP_002863445 hypothetical protein ARALYDRAFT_494394 [Arabidopsis lyrata subsp. lyrata]6426e-065
NP_568650 pollen_Ole_e_I-domain containing protein [Arabidopsis thaliana]6418e-065

Swiss-Prot top hits (Blast detail)Scoree value
O49813 Olee1-like protein4272e-041
Q8LGR0 Pollen allergen Che a 13842e-036
P13447 Anther-specific protein LAT523279e-030
O82015 Major pollen allergen Lig v 13027e-027
P19963 Major pollen allergen2973e-026

TrEMBL top hits (Blast detail)Scoree value
Q9LP44 F28N24.16 protein7795e-081
Q8L9P9 Ole e I (Main olive allergen)-like protein6424e-065
Q680L9 At5g458806415e-065
Q6NMJ2 At4g185966147e-062
O49527 Pollen-specific protein - like6112e-061

Arabidopsis top hits (Blast detail)Scoree value
AT1G29140.1 pollen Ole e 1 allergen and extensin family protein7802e-083
AT5G45880.1 pollen Ole e 1 allergen and extensin family protein6422e-067
AT4G18596.1 pollen Ole e 1 allergen and extensin family protein6153e-064
AT4G08685.1 SAH72507e-022
AT5G10130.1 pollen Ole e 1 allergen and extensin family protein2193e-018

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
113  14%
 
98  36%
 
107  32%
 
124  18%

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