 |
Information for unigene UN23573
| FASTA Sequence |
| Unigene ID: UN23573 | Length: 899 |
SSR | | GGGTGGTCATAAAAGTCCAAGGTAAAAGCTGGCCTCCATTCCACTTCTACACTGTGAGAAAAGAGAGAAGAAAAATAAAAAGGAGA
AAGATTTGGAAATTAAGGAAGAAACTGGAGAGTAGCTAGTAATGCCTTCTCATTCTGGAGATGACAATGTTCTTCAAGTTCTCATC
AAGAACTTCGATGTTCTTGCTCTCCCATTGGTCGCTCTCGTCTACCCTCTGTATGCATCAGTGAAAGCAATAGAGACAAAATCATT
AGCAGAAGACGAGCAATGGCTCACATACTGGGTTCTCTACGCAATCATCTCCCTCTTCGAACTCATTTTCTCCAAACTTCTCGAAT
TGTTTCCGATATGGCCGTTCTTGAAGCTGGTGGGGATATGCTGGCTAGTGCTGCCACAGTTTAACGGAGCAGAACATGTCTACAGA
CATTTCATCAGGCCATTCTACATGAACCCTCAAAGAGCTTCCACCAATATTTGGTACGTTCCTCAGAAGAAGCTCAACTTCTTTCC
GAAACGTGACGACGACGATATCCTCACTGCTGCTGAGAAGTACATGGAGAAACACGGCACCGACGCATTTGAACGAACGATCGTCA
GGAAGGATAGTTATGAAAGAGGGAGGAGAGGAGGAGGAGGAGGAGGAGGAGGAAGCAATAACTACATGATCTTTGATGATGATTAT
AGGTACTAAGTTTACCATGTTTCCTGTGGTTTTGATCGGTCACTGATCTGCTCTTAAACCTGTTTGGCTACATTATTCAGTTTGTA
AGCTGGGCTGTGTGACTTTTGTTTATCTCTATGACTTAAATAATTGTCAGGATTATGTTTAAGCTTCATCCTTATGTAGAGATATG
TGTCGCATGTTTTGTGTGAGTAATAGAATATCATATGCC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002887251 hypothetical protein ARALYDRAFT_476102 [Arabidopsis lyrata subsp. lyrata] | 827 | 3e-086 |
| NP_177128 HVA22-like protein c [Arabidopsis thaliana] | 810 | 2e-084 |
| ACU14656 unknown [Glycine max] | 602 | 3e-060 |
| XP_002522404 Protein HVA22, putative [Ricinus communis] | 590 | 8e-059 |
| XP_002274152 PREDICTED: hypothetical protein [Vitis vinifera] | 577 | 3e-057 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9S784 HVA22-like protein c | 810 | 1e-085 |
| Q9S7V4 HVA22-like protein a | 506 | 2e-050 |
| Q9SYX7 HVA22-like protein b | 370 | 1e-034 |
| Q682H0 HVA22-like protein f | 285 | 8e-025 |
| Q9FED2 HVA22-like protein e | 258 | 1e-021 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C6SZI3 Putative uncharacterized protein | 602 | 2e-060 |
| B9S8T5 Protein HVA22, putative | 590 | 5e-059 |
| C6SZP5 Putative uncharacterized protein | 544 | 1e-053 |
| A4UV42 Putative HVA22 protein | 540 | 3e-053 |
| Q60CZ6 HVA22-like protein c , putative | 540 | 3e-053 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
