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Information for unigene UN23578

FASTA Sequence
Unigene ID: UN23578Length: 1259  SNP
GGGTTTGTAATCTCCGCCTCCCCCGAGAAACTGATTATCCTAAGCTTCACCAGACGACGACGACAATGGCGGAAGGACTCGTTCTG
AAGGGCACCATGCGTGCACACACCGACATGGTCACCGCGATCGCCACCCCAATCGATAACTCCGACACCATCGTCTCAGCTTCCCG
TGACAAATCCATCATCGTATGGAAACTCACCAAGGACGACAAATCCTACGGAGTCGCTCAGAGACGTCTCACAGGCCACTCCCACT
TCGTCGAAGACGTCGTCCTCTCCTCAGACGGCCAATTCGCGCTTTCCGGAAGCTGGGACGGCGAGCTTCGCCTATGGGACCTCGCC
GCCGGTATCTCAACTCGCCGATTCGTCGGACACACGAAAGACGTGCTCTCTGTCGCTTTCTCACTCGACAACCGTCAGATCGTATC
GGCCTCTCGTGACCGTACGATCAAGCTGTGGAATACTCTGGGTGAGTGTAAGTACACTATCGCCGAAGGAGGCGGTGAGGGACACG
GCGAGTGGGTTAGCTGCGTTAGGTTCAGTCCCAACACGCTCCAGCCGACGATTGTGTCGGCCTCGTGGGACAAGACGGTGAAAGTG
TGGAACTTGTCCAACTGCAAGCTCAGATCGACTCTTGCTGGTCACACTGGGAATGTCAACACGGTGGCTGTGTCGCCTGATGGTTC
TCTCTGCGCCAGTGGAGGCAAAGATGGTGTGGTTTTGCTGTGGGATTTGGCTGAGGGGAAGAAGCTTTACTCTCTTGAGGCTAACT
CTGTCATTCATGCTCTTACCTTTAGTCCTAATAGGTATTGGCTATGTGCTGCTACTGAGCAGGGTATTAAGATTTGGGATCTTGAG
AGTAAGAGTGTTGTTGAGGACTTGAAGGTTGATCTCAAGGCTGAGGCTGAGAAGTCTGATGGAAGTGGTAGTGCTGCCACCAGAAG
GAAGGTTATCTACTGCACCAGCCTGAACTGGAGTGCGGATGGAAGCACCTTGTTCAGTGGATATACCGATGGAGTTATCAGAGTTT
GGGGTATTGGACGTTACTAGTTTATCCCATCTCTTTGCTCTGTCTCTCTCCTTGGTTGTGTTTTTATCTATCACTCTTTTCTTTTG
TCAACAAACTGAGATTTTGCAATAATGTTTGGTTTTATGTCAATTCTAGGTTTGGATCTTTTTATTTTTTTTATGAGATCTTGTTT
GAAGTTACTTCTGTTTTGTGGCCGTGATATTTTTGATAATCTATCAAAGTGGTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
Q39336 RecName: Full=Guanine nucleotide-binding protein subunit beta-like protein16332e-179
XP_002890259 hypothetical protein ARALYDRAFT_889221 [Arabidopsis lyrata subsp. lyrata]16332e-179
NP_173248 guanine nucleotide-binding protein subunit beta-like protein [Arabidopsis thaliana]16251e-178
3DM0 Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana16251e-178
AAB82647 WD-40 repeat protein [Arabidopsis thaliana]16223e-178

Swiss-Prot top hits (Blast detail)Scoree value
Q39336 Guanine nucleotide-binding protein subunit beta-like protein16336e-181
O24456 Guanine nucleotide-binding protein subunit beta-like protein16255e-180
Q39836 Guanine nucleotide-binding protein subunit beta-like protein14751e-162
O24076 Guanine nucleotide-binding protein subunit beta-like protein14705e-162
P93340 Guanine nucleotide-binding protein subunit beta-like protein13972e-153

TrEMBL top hits (Blast detail)Scoree value
Q9C4Z6 Guanine nucleotide-binding protein, putative15211e-166
Q9LV28 AT3g18130/MRC8_1115192e-166
Q8LAF2 Guanine nucleotide-binding protein, putative15147e-166
B9SU88 Receptor for activated protein kinase C, putative14842e-162
A5BV59 Putative uncharacterized protein14752e-161

Arabidopsis top hits (Blast detail)Scoree value
AT1G18080.1 ATARCA; nucleotide binding16264e-181
AT1G48630.1 RACK1B_AT (RECEPTOR FOR ACTIVATED C KINASE 1 B); nucleotide binding15224e-169
AT3G18130.1 RACK1C_AT (RECEPTOR FOR ACTIVATED C KINASE 1 C); nucleotide binding15207e-169
AT5G25150.1 TAF5 (TBP-ASSOCIATED FACTOR 5); nucleotide binding / transcription regulator2634e-023
AT4G02730.1 transducin family protein / WD-40 repeat family protein2528e-022

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
114  40%
 
123  30%
 
212  20%
 
201  10%

Unigene MembersMember information