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Information for unigene UN23578
| FASTA Sequence |
| Unigene ID: UN23578 | Length: 1259 |
| SNP | GGGTTTGTAATCTCCGCCTCCCCCGAGAAACTGATTATCCTAAGCTTCACCAGACGACGACGACAATGGCGGAAGGACTCGTTCTG
AAGGGCACCATGCGTGCACACACCGACATGGTCACCGCGATCGCCACCCCAATCGATAACTCCGACACCATCGTCTCAGCTTCCCG
TGACAAATCCATCATCGTATGGAAACTCACCAAGGACGACAAATCCTACGGAGTCGCTCAGAGACGTCTCACAGGCCACTCCCACT
TCGTCGAAGACGTCGTCCTCTCCTCAGACGGCCAATTCGCGCTTTCCGGAAGCTGGGACGGCGAGCTTCGCCTATGGGACCTCGCC
GCCGGTATCTCAACTCGCCGATTCGTCGGACACACGAAAGACGTGCTCTCTGTCGCTTTCTCACTCGACAACCGTCAGATCGTATC
GGCCTCTCGTGACCGTACGATCAAGCTGTGGAATACTCTGGGTGAGTGTAAGTACACTATCGCCGAAGGAGGCGGTGAGGGACACG
GCGAGTGGGTTAGCTGCGTTAGGTTCAGTCCCAACACGCTCCAGCCGACGATTGTGTCGGCCTCGTGGGACAAGACGGTGAAAGTG
TGGAACTTGTCCAACTGCAAGCTCAGATCGACTCTTGCTGGTCACACTGGGAATGTCAACACGGTGGCTGTGTCGCCTGATGGTTC
TCTCTGCGCCAGTGGAGGCAAAGATGGTGTGGTTTTGCTGTGGGATTTGGCTGAGGGGAAGAAGCTTTACTCTCTTGAGGCTAACT
CTGTCATTCATGCTCTTACCTTTAGTCCTAATAGGTATTGGCTATGTGCTGCTACTGAGCAGGGTATTAAGATTTGGGATCTTGAG
AGTAAGAGTGTTGTTGAGGACTTGAAGGTTGATCTCAAGGCTGAGGCTGAGAAGTCTGATGGAAGTGGTAGTGCTGCCACCAGAAG
GAAGGTTATCTACTGCACCAGCCTGAACTGGAGTGCGGATGGAAGCACCTTGTTCAGTGGATATACCGATGGAGTTATCAGAGTTT
GGGGTATTGGACGTTACTAGTTTATCCCATCTCTTTGCTCTGTCTCTCTCCTTGGTTGTGTTTTTATCTATCACTCTTTTCTTTTG
TCAACAAACTGAGATTTTGCAATAATGTTTGGTTTTATGTCAATTCTAGGTTTGGATCTTTTTATTTTTTTTATGAGATCTTGTTT
GAAGTTACTTCTGTTTTGTGGCCGTGATATTTTTGATAATCTATCAAAGTGGTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| Q39336 RecName: Full=Guanine nucleotide-binding protein subunit beta-like protein | 1633 | 2e-179 |
| XP_002890259 hypothetical protein ARALYDRAFT_889221 [Arabidopsis lyrata subsp. lyrata] | 1633 | 2e-179 |
| NP_173248 guanine nucleotide-binding protein subunit beta-like protein [Arabidopsis thaliana] | 1625 | 1e-178 |
| 3DM0 Chain A, Maltose Binding Protein Fusion With Rack1 From A. Thaliana | 1625 | 1e-178 |
| AAB82647 WD-40 repeat protein [Arabidopsis thaliana] | 1622 | 3e-178 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q39336 Guanine nucleotide-binding protein subunit beta-like protein | 1633 | 6e-181 |
| O24456 Guanine nucleotide-binding protein subunit beta-like protein | 1625 | 5e-180 |
| Q39836 Guanine nucleotide-binding protein subunit beta-like protein | 1475 | 1e-162 |
| O24076 Guanine nucleotide-binding protein subunit beta-like protein | 1470 | 5e-162 |
| P93340 Guanine nucleotide-binding protein subunit beta-like protein | 1397 | 2e-153 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9C4Z6 Guanine nucleotide-binding protein, putative | 1521 | 1e-166 |
| Q9LV28 AT3g18130/MRC8_11 | 1519 | 2e-166 |
| Q8LAF2 Guanine nucleotide-binding protein, putative | 1514 | 7e-166 |
| B9SU88 Receptor for activated protein kinase C, putative | 1484 | 2e-162 |
| A5BV59 Putative uncharacterized protein | 1475 | 2e-161 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G18080.1 ATARCA; nucleotide binding | 1626 | 4e-181 |
| AT1G48630.1 RACK1B_AT (RECEPTOR FOR ACTIVATED C KINASE 1 B); nucleotide binding | 1522 | 4e-169 |
| AT3G18130.1 RACK1C_AT (RECEPTOR FOR ACTIVATED C KINASE 1 C); nucleotide binding | 1520 | 7e-169 |
| AT5G25150.1 TAF5 (TBP-ASSOCIATED FACTOR 5); nucleotide binding / transcription regulator | 263 | 4e-023 |
| AT4G02730.1 transducin family protein / WD-40 repeat family protein | 252 | 8e-022 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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