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Information for unigene UN23584

FASTA Sequence
Unigene ID: UN23584Length: 722 SSR 
GGATCCTCTTTAGCTGCAACTTCTTTTATTCAAATCTTTCTTCTCAAATCATCAAACAATGGAATTCTGGGGAGTTGAAGTTCTCG
CAGGGAAGTCAGTTAAAGTGAAGCCTGATTTTGAAACACTCATCCATGTTTCCCAGGCATCACTTGATAAAGGGAAAAAGGGAGAA
ACCGCTTTGTTGTATGTGACGGTTGATGGGAAGAAGCTTGTGATGGGAACACTCTCTCAAGGCAACATTCCTCAGATTAGCTTCGA
TCTCGTCTTTGAGAAGGAGTTTGAGCTTTCCCACAGTTTGGAGAGCGGAAGTGTCCACTTTGTCGGATACAAGTCCCCCAACATGC
CCGAAGACGAGGAGGACTTCTCTGACTCAGAAGAGGAGGAGGAGGAAGCTGCAGCAGTTCCTGCGACAGCTGTCACTGTCAAGGCT
GACTCGAAACCAAAGGCCAAGCCTGCGGAGGAAGTGAAGCCTGAATCAGATGATGATGATGATGAGGATGAGGAGGAGGATGATTC
TGAAGAGGATGGATCCGACTCTGAGAAAGGAATGGATGTTGACGAGGATGATTCAGAGGATGAGGAGGATGATTCTGAGGATGAAG
ATGATGAGACCCCTAAGAAGCCTGAGGTGGTGTCGAACAAAAAGAGGCCGAATGAATCTGCTGCTTCCAAAGCAGCTATTTCAGCA
AAGAAAGCAAAACCAGCTACACCACACCCAGCTA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002872015 predicted protein [Arabidopsis lyrata subsp. lyrata]6183e-062
NP_851056 histone deacetylase HDT2 [Arabidopsis thaliana]5961e-059
NP_197657 histone deacetylase HDT2 [Arabidopsis thaliana]5961e-059
XP_002875683 hypothetical protein ARALYDRAFT_484880 [Arabidopsis lyrata subsp. lyrata]4858e-047
ACG39306 histone deacetylase 2b [Zea mays]4444e-042

Swiss-Prot top hits (Blast detail)Scoree value
Q56WH4 Histone deacetylase HDT25965e-061
Q9FVE6 Histone deacetylase HDT14244e-041
Q6V9I6 Histone deacetylase HDT14049e-039
Q9M4U4 Histone deacetylase HDT33968e-038
O24591 Histone deacetylase HDT13951e-037

TrEMBL top hits (Blast detail)Scoree value
Q3E700 Putative uncharacterized protein At5g22650.25967e-060
B6TQC3 Histone deacetylase 2b4443e-042
C5YUI2 Putative uncharacterized protein Sb09g0267304434e-042
B8AXI7 Putative uncharacterized protein4353e-041
Q0DFD6 Os05g0597100 protein4344e-041

Arabidopsis top hits (Blast detail)Scoree value
AT5G22650.1 HD2B (HISTONE DEACETYLASE 2B); histone deacetylase5965e-062
AT5G22650.2 HD2B (HISTONE DEACETYLASE 2B); histone deacetylase5965e-062
AT3G44750.1 HDA3 (HISTONE DEACETYLASE 3); histone deacetylase/ nucleic acid binding / zinc ion binding4244e-042
AT5G03740.1 HD2C (HISTONE DEACETYLASE 2C); histone deacetylase/ nucleic acid binding / transcription repressor/ zinc ion binding3941e-038
AT5G63740.1 zinc finger protein-related1493e-010

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
72  100%

Unigene MembersMember information