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Information for unigene UN23589
| FASTA Sequence |
| Unigene ID: UN23589 | Length: 716 |
SSR | | AGGGACACACACACACTGTTCTGTACTAAAGAGAGAAAGCAGAGAGAAACCCTAAGAAAATAGCGAGAGATGTCTTCCGTTGCAGC
TAGGGTTTTCAGGGGATGCAGATCGCTTCTAGCTCCTGCGTCTCGAGCCGCCGCCACCTCTTCCCTGCTCTCTTCCTCGAGGAGCT
TAACCACTATCACCGCCGGAGGCACCAAGAAGTCGGCGGCGAAACCTAAGCCAAAGTCGAAACCAGACCCTCCGGCGAAGAAGAAG
ACGCCGAGGACTACCAGAATCTTCAAGGCCACCCCTGTCTCTCCCACTCTCGCTCAGTTCCTCGGTACCGGTGAAACCACACGCAC
CGACGCCGTCAAAGAGGTTTGGACCTATGTTAAGTCCCACGACCTTCAGAATCCTGCTGACAAGAGGGAGATCTTCTGCGACGAGA
AGCTGAAGCAAATCTTCGAAGGCAAAGACAAGGTCGGGTTTCTGGAGGTCACAAAGCTCTTGTCCACTCACTTCGTGAAGACTGCT
TGACTTATCAGCTCAACATGATGGAAGCTCTTGTTCTCGTTGTTAAGTAACGTTGTCAAATAATCTATTTAACTCTTTAGTGTCTG
TTAAAAAAAAGATCGCAAACATGGTTTAACTTGTAGTATTTTGTTTTGGCATCAAATTTGCAGACTATTAATGTTAATCAAGTAAT
CATCAATTACTTACTTTTCAAAAAAAAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002884397 hypothetical protein ARALYDRAFT_477604 [Arabidopsis lyrata subsp. lyrata] | 519 | 9e-051 |
| NP_566210 SWIB/MDM2 domain-containing protein [Arabidopsis thaliana] | 518 | 1e-050 |
| AAM65610 unknown [Arabidopsis thaliana] | 510 | 1e-049 |
| XP_002523973 brg-1 associated factor, putative [Ricinus communis] | 322 | 6e-028 |
| XP_002270166 PREDICTED: hypothetical protein [Vitis vinifera] | 309 | 2e-026 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q05024 Protein TRI1 | 189 | 8e-014 |
| O74503 Upstream activation factor subunit spp27 | 184 | 3e-013 |
| Q08747 Upstream activation factor subunit UAF30 | 172 | 7e-012 |
| Q2TBN1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 | 125 | 2e-006 |
| Q96GM5 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1 | 125 | 2e-006 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9SS61 At3g03590 | 518 | 8e-051 |
| Q8LA28 Putative uncharacterized protein | 510 | 7e-050 |
| B9SDA4 Brg-1 associated factor, putative | 322 | 4e-028 |
| A5BKY5 Putative uncharacterized protein | 309 | 1e-026 |
| Q6V9I4 SWIb domain-containing protein (Fragment) | 285 | 8e-024 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT3G03590.1 SWIB complex BAF60b domain-containing protein | 543 | 6e-056 |
| AT2G35605.1 SWIB complex BAF60b domain-containing protein | 268 | 5e-024 |
| AT1G31760.1 SWIB complex BAF60b domain-containing protein | 260 | 4e-023 |
| AT4G34290.1 SWIB complex BAF60b domain-containing protein | 258 | 7e-023 |
| AT2G14880.1 SWIB complex BAF60b domain-containing protein | 254 | 2e-022 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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