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Information for unigene UN23592

FASTA Sequence
Unigene ID: UN23592Length: 986 SSR 
GGAATCTTCCGATCTTTTATTCTTCCTTCTCGCTTTGATCGTCATCACCCAGATCCTCCATTCTCCTTCGTTCCTCCTTGGAGGAT
CAGATCTTGGAAGGTCCTCAGCTCAAGGAGAGGAGTAGAAGAAGAAGAAGGGTGAGGAGAGAGAGAGAGACTTTGAATTGAAGGAT
GTCTTCTTTCACAGGAACTCAGCAGAAATGCAAGGCTTGCGAGAAGACGGTGTACCCTGTGGAGCTTCTCTCAGCTGATGGTGTTA
GCTATCACAAGTCTTGCTTCAAATGCACTCACTGCAAGTCCAGGCTTCAGCTGAGTAGATACTCATCAATGGAAGGTGTGTTGTAC
TGTAAGCCTCATTATGAGCAGCTCTTCAAGGAGTCTGGTAGCTTCACCAAGAACTTTCAGTCACCTGTTAAACCGGCGGCTGAGAA
ATCAAGTCCTGAGCTGACAAGGACCCCTAGCCGAGTTGCTGGTATGTTCTCAGGCACACAAGAGAAATGCGCCACTTGCAGTAAAA
CTGTCTATCCTATCGAAAAGGTAACAGTGGAGAGCCAGACATATCACAAGTCCTGCTTCAAATGCTCACACGGAGGCTGCCCTATC
TCACCATCAAACTACGCAGCTCTTGAAGGGATTCTCTACTGCAAGCACCATTTCGCTCAGCTTTTCAAGGAAAAGGGAAGCTACAA
CCACTTGATCAAATCTGCTTCCATCAAACGCTCTGCCGCAGCCGCAGTCGCTGCCGGTACACCTGCAGCCGCCGTACCTGAATCTT
AAAAAACTCAAATAATCCTCTCTCTATTCTCTAGTCTAAATTGAAAACTCGATGCCAAACTGATTCAGTTTGTTTTCTCAGTTTGT
GTCTTTTGTGTATGAGTGTGTAATCTATCTATCCTTTGATGTTCTTTGCTTCCTTTAATCTCTCCTAAAGCTTGTTTGTTGTCGTG
ATTTGCTATCTCTATAAAAAAAACTCAGACTTTCCTTTTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_191136 GATA type zinc finger transcription factor-like protein [Arabidopsis thaliana]9886e-105
BAH20111 AT3G55770 [Arabidopsis thaliana]9814e-104
XP_002876333 LIM domain-containing protein [Arabidopsis lyrata subsp. lyrata]9814e-104
XP_002879831 LIM domain-containing protein [Arabidopsis lyrata subsp. lyrata]9644e-102
NP_181519 LIM domain-containing protein [Arabidopsis thaliana]9537e-101

Swiss-Prot top hits (Blast detail)Scoree value
P29675 Pollen-specific protein SF35492e-055
Q4U4S6 Xin actin-binding repeat-containing protein 22373e-019
Q4KM31 LIM domain-containing protein 22222e-017
Q1LZA7 LIM domain-containing protein 22194e-017
Q9BT23 LIM domain-containing protein 22194e-017

TrEMBL top hits (Blast detail)Scoree value
Q9M047 AT3G55770 protein9884e-105
B9DH94 AT3G55770 protein9813e-104
O04193 At2g39900/T28M21.69535e-101
C6TL24 Putative uncharacterized protein8801e-092
A5BSA7 Putative uncharacterized protein8569e-090

Arabidopsis top hits (Blast detail)Scoree value
AT3G55770.1 LIM domain-containing protein9892e-107
AT3G55770.2 LIM domain-containing protein9892e-107
AT3G55770.3 LIM domain-containing protein9892e-107
AT3G55770.4 LIM domain-containing protein9892e-107
AT3G55770.5 LIM domain-containing protein9892e-107

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  13%
 
205  63%
 
112  25%

Unigene MembersMember information