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Information for unigene UN23595

FASTA Sequence
Unigene ID: UN23595Length: 561 SSR 
GGATTCATCATCTCTCTGCGCCTCTCTCTCTCTCTCAAACTCTCAGCTCACACAGACGACAATCATCATGGGGAAGAAGAAGTTCA
TCGACAAGAAAAAGGCGGCGACTTTCGAGCTCTGCCCTCGCGACACCTCAGACCCTTTATACAGCGACGCCCCCGGAGGCGATAAG
ATCTTCTTACGAGTCGATCAGAACCCTGTCAACATCAACGGTTTCACTGAAGACAACTCACAGTTCGATGACGCCCCTGAAGAAGG
AGGAGAAGAAGATTTGGCTTACGGCTACTCCAGCTTCGCGGGTTCGAGCAGCAGCAACAACAACCCTTTGCCTGCTCACGTGAGGA
AGGAGATTCTCGAGCTGGGTTACCCTGACGATGGGTATAACTACTTGGACCATTTGAGAGAGATCAAGAACACTGGCGGCGGTTCT
AACTTCTACTCTAACCCTAAGTTCGAAGGCGAGTTTCTTCCTCGTGACGACGTCAAGGCTTATGATGCTTCTCGCGTGAAGGTCTC
TGGTGTGGTGGTGGAGGATGGTGGTGGTGATGATGATAAGTTGAT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002877717 hypothetical protein ARALYDRAFT_485357 [Arabidopsis lyrata subsp. lyrata]6333e-064
NP_190568 uncharacterized protein [Arabidopsis thaliana]6306e-064
XP_002510479 conserved hypothetical protein [Ricinus communis]2874e-024
XP_002280700 PREDICTED: hypothetical protein [Vitis vinifera]2589e-021
NP_001060380 Os07g0634300 [Oryza sativa Japonica Group]2543e-020

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9SN19 At3g499906305e-064
B9R836 Putative uncharacterized protein2873e-024
A2YP11 Putative uncharacterized protein2542e-020
B9H4I8 Predicted protein2542e-020
Q7XI60 Os07g0634300 protein2542e-020

Arabidopsis top hits (Blast detail)Scoree value
AT3G49990.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Low temperature viability protein (InterPro:IPR007307); Has 1404 Blast hits to 1163 proteins in 173 species: Archae - 5; Bacteria - 61; Metazoa - 489; Fungi - 146; Plants - 69; Viruses - 17; Other Eukaryotes - 617 (source: NCBI BLink).6303e-066

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  50%
 
81  50%

Unigene MembersMember information