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Information for unigene UN23619

FASTA Sequence
Unigene ID: UN23619Length: 967  SNP
GGGAATAATATCTGCCAAAATAAAAAAAAACAGAAAAATAAAAAGATAGAAAACGTTTCAGTGTCTCCGACCAAGCTATACGACCA
TCTGAATCGGATTAGGGTATAAGACTAGTCGGAGAAAGAAGTCATGGGAAGAAGAAAAGTGGAGATCAAACGAATTGAGAGCAAAA
GCAGTCAACAAGTCACTTTCTGTAAACGCCGCAATGGTCTCATAGAGAAAGCTCGTCAGCTCTCAGTTCTTTGTGAATCGTCAGTG
GCCATTCTAATGGTTTCCTCCACCGGAAAACTCTATAGCTCCTCCTTTGGCGATAGCATGGCCAAAATCATCAAGCGTTATGAGAT
ACAACATGCTGCTGCACTTAAAAACATGGATCTAGCAGAGAAATCTCGGAATTATCTTTCACACAAGGAGTTACTGGAAATAGTCA
AGTGCAAGCTTGATGAAGCGAATCTCGATGATGCAAGTGTAGAGTCTCTAATTTACCTGGAAGGGCAGTTCAAGGCTGCTCTGTCT
GTAACTAGAGCTAGGAAGACAGAACTAATGTGGGAGCTTGTGAAAAATCTTGAAGAGAAGGAAAAACTGTTGAGAGAAGAGAATCA
TATTTTGGTCAGCCAGCTAGCAAAGATGGAGAAGAAGAGGCTTCCGGAAACAGAGGATGAAGGAGCAATGTCATCGGTAAATAGCT
ACGGCAACAGCCCACCGAAGACCCTCCCTCTTCTAAAGTAACAATCATCATCATCGGCTGCTTTTGCAGCATATCCTGGTTTTAAA
TAAATGTAAAAAAAAATCATATATGTATCCTAAACATCCTCTTCTTCACCTGATCATACGGAAAGTTGAAGAAAAGAAACTCAGGG
AAATCATTAAACTATCTTTGCTGTTACCTTTGGAGACATGATCACAGTTTCATATGGTTTCTATGTTTTTTATGATCTTGTGTTGA
AAAGTATGACTTATTGAGCTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_201312 K-box region and MADS-box transcription factor family protein [Arabidopsis thaliana]6454e-065
ACL93428 MAF4 [Arabidopsis thaliana]6436e-065
ACL93436 MAF4 [Arabidopsis thaliana]6411e-064
NP_201313 K-box region and MADS-box transcription factor family protein [Arabidopsis thaliana]6382e-064
AAO65320 MADS affecting flowering 5 variant I [Arabidopsis thaliana]6321e-063

Swiss-Prot top hits (Blast detail)Scoree value
Q9FPN7 Agamous-like MADS-box protein AGL315814e-059
Q9S7Q7 MADS-box protein FLOWERING LOCUS C5205e-052
Q9SAR1 MADS-box transcription factor 82624e-022
A2XDY1 MADS-box transcription factor 12616e-022
Q10PZ9 MADS-box transcription factor 12616e-022

TrEMBL top hits (Blast detail)Scoree value
Q84NB2 MADS affecting flowering 4 variant I6453e-065
C0J8M0 MAF46434e-065
C0J8M8 MAF46417e-065
Q683D7 At5g650806382e-064
Q84NA7 MADS affecting flowering 5 variant I6328e-064

Arabidopsis top hits (Blast detail)Scoree value
AT5G65070.1 MAF4 (MADS AFFECTING FLOWERING 4); transcription factor6461e-067
AT5G65080.1 MAF5 (MADS AFFECTING FLOWERING 5); transcription factor6433e-067
AT1G77080.4 MAF1 (MADS AFFECTING FLOWERING 1); transcription factor6083e-063
AT5G65060.1 MAF3 (MADS AFFECTING FLOWERING 3); transcription factor5922e-061
AT5G65050.3 AGL31 (AGAMOUS LIKE MADS-BOX PROTEIN 31); transcription factor5851e-060

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  10%
 
95  50%
 
83  30%
 
111  10%

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