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Information for unigene UN23626
| FASTA Sequence |
| Unigene ID: UN23626 | Length: 1311 |
| SNP | GGACATAACCAATCTGAAGAAGAGCTATACAAAATAAGATATAAAACCCCCTTTCTCGTGTTTCAACAAAAAAAAAAGACCCCCTT
TCTCATCTTTTGAAATTACATCCAAACCCAACTGTTGGTACTCATGTCCTCCAGATCGATTTACCGTACTCTACGACCGGTGCTAT
CCTCCGGTTTAGGTACTGGACATGGAATAAAGGGACATGTCATGAGCCACTTGCCCATTATTCGGTTTTTGAGCTCCGACACGTCA
CCTTCGGCAACTGGGAATAGCCAGTCGGAAAATCCCGTCCGAACCACCGACGGCAAAGTCATATCCACTTATTGGGGTATACCTCC
GACTAAGATTACTAAACCGGACGGTTCAGCTTGGAAGTGGAATTGTTTTCAACCATGGGATTCATACAAACCGGACGTGTCCATTG
ATGTAACCAAACATCACAAACCGTCCAATTTCACTGACAAATTCGCATATTGGACCGTCCAAACTCTGAAAATACCGGTTCAACTA
TTTTTTCAGAGGAAGCATATGTGCCATGCAATGTTGCTGGAGACCGTGGCGGCGGTGCCAGGAATGGTGGGAGGGATGCTTTTGCA
CTTGAAATCTCTACGGAGGTTCGAACATAGTGGCGGATGGATCAAAGCTTTGCTCGAAGAGGCCGAGAACGAGCGTATGCATCTCA
TGACCTTCATCGAACTCTCACAACCCAAATGGTACGAACGGGCGATTGTGTTTGCGGTCCAAGGTGTTTTCTTCAACGCATATTTC
TTGTCTTATGTAATTTCTCCGAAACTTGCTCACCGTATCACTGGATACTTAGAAGAAGAAGCTGTCAATTCTTATACCGAATTTCT
CAATGACATTGATGCCGGAAAGTTTGAAAACTCACCAGCTCCGGCCATCGCGATTGATTACTGGCGGTTGCCTAAAGATGCGACGC
TGAGGGACGTGGTTTTTGTTATCCGAGCTGACGAAGCTCACCACCGAGACATTAACCATTATGCTTCGGACATACAATTTCAAGGA
CGCGAACTCAAGGAAGCTCCAGCTCCGATTGGATATCACTAAGATCATGCGACACAAATTTGAATAGATCGATGTATGACAAATAT
ATGTGGTTGAGTTTATCCAGAAACAAATATCTGGTCGATACATATGTATAGTTATAAATAAATTTACACGATATTACATTATCTAA
AAGCGATGATGCGCGGAAAATTTCTTATATACCAGTTGAAATATATTTTGTAAGTTATAACATTGACTACAATGTTTAAATGTCTA
ACATGCATCACTGTTTTTCTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_564395 alternative oxidase 3 [Arabidopsis thaliana] | 1545 | 3e-169 |
| XP_002893720 At1g32350/F5D14.4 [Arabidopsis lyrata subsp. lyrata] | 1544 | 3e-169 |
| AAM62685 oxidase, putative [Arabidopsis thaliana] | 1537 | 2e-168 |
| CAB72441 alternative oxidase [Populus tremula x Populus tremuloides] | 1176 | 2e-126 |
| XP_002304386 predicted protein [Populus trichocarpa] | 1153 | 7e-124 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8LEE7 Alternative oxidase 3, mitochondrial | 1545 | 1e-170 |
| Q40578 Alternative oxidase 2, mitochondrial | 1098 | 7e-119 |
| Q39219 Alternative oxidase 1a, mitochondrial | 1089 | 8e-118 |
| Q41224 Alternative oxidase 1, mitochondrial | 1075 | 3e-116 |
| O23913 Alternative oxidase 1b, mitochondrial | 1065 | 5e-115 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q08A65 Alternative oxidase | 1545 | 2e-169 |
| Q9M432 Alternative oxidase | 1176 | 1e-126 |
| B9GZX6 Alternative oxidase (Fragment) | 1153 | 5e-124 |
| A5BUW6 Alternative oxidase | 1143 | 7e-123 |
| Q84V46 Alternative oxidase | 1130 | 2e-121 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G32350.1 AOX1D (alternative oxidase 1D); alternative oxidase | 1546 | 7e-172 |
| AT3G22370.1 AOX1A (ALTERNATIVE OXIDASE 1A); alternative oxidase | 1090 | 6e-119 |
| AT3G22360.1 AOX1B; alternative oxidase | 1066 | 3e-116 |
| AT3G27620.1 AOX1C; alternative oxidase | 1050 | 2e-114 |
| AT5G64210.1 AOX2; alternative oxidase | 1006 | 3e-109 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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