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Information for unigene UN23656
| FASTA Sequence |
| Unigene ID: UN23656 | Length: 817 |
SSR | | CGACAAAACGAGGGGTCGTTTTATTATTACAATATTTTACATATTTAGAATATAGCGACGGGTATAAGCTAATAATAATAATAAGT
ACACTGCAGTACATATTTAACAAATAACAAATGCACAATCACAAATACTAGCGCTCCAAATATGTCATAGTATTATTCGCGGTTCA
TATCATCGCTGCTTAGAGAGCTGTTGCAGCCATATAGCTTTTGCGATACGCAGCTGCGTATGCTGGATAGAACATTTGGCTAACCC
CTTCCGCCTTAAGATGAGGAATCAACATTTTCATAGACAAACCAAAAAGTCTGAGGCTATGCCAAATGCGAAGAGGAGATGGGAAT
GGAGAGAGCAGTTGACCAATGGAGGATAGAGTAATACCACAAAGATGAAAGATGAGAGAGAGTGGCCGAGGGTTCATGCCTCCGAG
CAGAGCCATCATGCCTGACGTGCGAAAGCCGCCACTAGAGAGGTAATCAAAACAGCCTTGTTGCATCGCTTCTTTTGCTTCGTCCG
TCGATGCAACTAGCACTTGAGAAAATGCATTTCCTAGTGTGTTCACCGTCGCTGACATTGGCTTTCGGATGATATAAAATGACTTA
ATAACTTCTGAGATTTTGTTTGCATCACCAAGGTTTCGCAATGGCTGGAGAAGGCGGCGTAGGATGAGAATGTCAGACAATAAAAC
CATCATTCCAGATGCAATTGCTGGGTGACGCATGTTGAATGCATCTCCCAATACAATCACTCCTTGCTTCTCGCTCAAAGTAGCTT
CCATTCTCTTTGTTGGCATTGTTTTTATTTGTGCTCCCTCATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| CAA06772 squalene epoxidase homologue [Arabidopsis thaliana] | 943 | 8e-100 |
| NP_197803 Squalene monooxygenase 1,1 [Arabidopsis thaliana] | 943 | 8e-100 |
| XP_002874172 predicted protein [Arabidopsis lyrata subsp. lyrata] | 932 | 1e-098 |
| XP_002874174 predicted protein [Arabidopsis lyrata subsp. lyrata] | 929 | 3e-098 |
| XP_002874173 hypothetical protein ARALYDRAFT_910438 [Arabidopsis lyrata subsp. lyrata] | 920 | 4e-097 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O65404 Squalene monooxygenase 1,1 | 943 | 4e-101 |
| O65402 Squalene monooxygenase 1,2 | 918 | 3e-098 |
| O65726 Squalene monooxygenase 1,2 | 856 | 4e-091 |
| O65727 Squalene monooxygenase 1,1 | 844 | 1e-089 |
| O65403 Squalene monooxygenase 2 | 685 | 3e-071 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DFB1 AT5G24150 protein | 943 | 5e-100 |
| Q8RWI1 Putative uncharacterized protein At5g24150 | 918 | 4e-097 |
| Q2V349 Putative uncharacterized protein At5g24150.2 | 785 | 1e-081 |
| B6U6N2 Squalene monooxygenase | 522 | 4e-051 |
| B9R6V0 Squalene monooxygenase, putative | 521 | 5e-051 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G24150.1 SQP1; squalene monooxygenase | 944 | 3e-102 |
| AT5G24160.1 SQE6 (SQUALENE MONOXYGENASE 6); FAD binding / oxidoreductase/ squalene monooxygenase | 919 | 2e-099 |
| AT5G24150.2 SQP1; squalene monooxygenase | 785 | 7e-084 |
| AT5G24140.1 SQP2; FAD binding / oxidoreductase/ squalene monooxygenase | 686 | 2e-072 |
| AT1G58440.1 XF1; squalene monooxygenase | 503 | 3e-051 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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