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Information for unigene UN23679

FASTA Sequence
Unigene ID: UN23679Length: 1412 SSR 
GACCAAACCCTAATCCGCTCTGTTTTCCTTGTATTTCTGCGCCATCCTACTACTTTAACGGTTCTCCTTTTTCGGAGGTGAAAGGA
AAAAAAAAACCGAATATCTCTAGATCTCTCGTTTGAGTGTTGACTCATCAACACCCTTCTGCTATCTCTCTTCTCCTTTGAATTTT
CATTGGATTTACCGTCTTTTTTGGAGGAAGAAAAAGAAGAGAAGGAGAAGAAGAAGAAGAAAAAAAAATCGATGATGAATGACATC
ATTTATCTTAGTTCAGACGAGGAGGATCATAAACTAGTCGATCACACTTCTTTCTTTTACGATGACAAACCTAAGCGTACTTGTCA
ATGGAAACCAGTTTCCGAGGATTTAACGGTGGAGGACGACGATGATTGTGTGGTATTGGATGGTGATCCTTACAAGACAAAGGAAA
AGGAGACTACACTTCACACTTGTGAAGCCGATGACGACATCCTTGTGCTAGGGCAAAAGGGTGAGATAGCTTGTATAGACTTCCCA
CATCCGCGACATGCCTGCGCTAAGTACCCTTTCAATTCCACGTCACACGACAAGTATTGTGACATGTGTCACTGTTATGTTTGTGA
CATACGTGCCCCGTGTCCTCACTGGTGCATTGGTATCTCAACCTATAATCACTGTCATGCCAATGATAAAGATCAGATATGGAAGA
ATCAACGTGAATGCATCAGAACTGGAACATTACTTCCGCCTCAAACTATGCTACAAAACACTTGGTATTCCCCTGTAAACCAGTTT
GGGCCATCTACTATGGTTGCGCCTCGCCCAAACACGTACATCAGACCTGGTTACAGATCCGAGCAACCAAGAACCTCTCCGCAAAA
TCGACAACCTCGTGCTCCTCATCAGTTATACCGAAACCAAAACGATAGGTTTAATAATGGTAACCCAATCCCCCAAGTGTTCTCTT
CCAAACCTCACTCATGGACTCCACAGAGACCAAGTTTACGCGCTACTCCTTTGGACGTTGCTCAAGGCTTGCCGTATAACCCTTAC
GTCACTCCTCCCACGGCTTTACAAAGCAATTCACAGCAGACGTTTCGTGATTATTCACAGCAATTTAGCCGGACAAGTGCAGTTTG
GTCTGGACCACCTAATCCTCCAGTGAAGCAGCAGCAGCAACAACAACAAAGAAGTGTCAATAGAACACTTTCGGAGATTGAAGACT
GGCTCATGGACATTGGACAGCACTACCCGGATTGATCCGGCTTGTTCCTTTATCTGGTCCAATTCGGTCTCGAAGCCTTCTTTGGA
TGATTCGAACATTAGGATTGTATTTTCATATTAGTTAAATTTAGAATCAGTATGTACATAGTAGTATTAGCCAAGAGCTTTTTGGT
TAGGACGTTTAGTTTACGAAAACATATTGTTATCAG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_179621 RPM1 interacting protein 13 [Arabidopsis thaliana]5166e-050
XP_002869484 hypothetical protein ARALYDRAFT_328829 [Arabidopsis lyrata subsp. lyrata]5131e-049
NP_194598 uncharacterized protein [Arabidopsis thaliana]4809e-046
CAA22983 hypothetical protein [Arabidopsis thaliana]4512e-042
XP_002886273 hypothetical protein ARALYDRAFT_319882 [Arabidopsis lyrata subsp. lyrata]4432e-041

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9SK71 At2g203105164e-050
Q08AA3 At4g286904806e-046
Q9SVT7 Putative uncharacterized protein AT4g28690 (Fragment)4511e-042
C5WZD3 Putative uncharacterized protein Sb01g0198203329e-029
A2Z8B2 Putative uncharacterized protein3302e-028

Arabidopsis top hits (Blast detail)Scoree value
AT2G20310.1 RIN13 (RPM1 INTERACTING PROTEIN 13)5162e-052
AT4G28690.1 LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: RIN13 (RPM1 INTERACTING PROTEIN 13) (TAIR:AT2G20310.1); Has 370 Blast hits to 352 proteins in 105 species: Archae - 0; Bacteria - 10; Metazoa - 143; Fungi - 82; Plants - 80; Viruses - 3; Other Eukaryotes - 52 (source: NCBI BLink).4803e-048
AT4G27660.1 unknown protein2913e-026
AT5G54150.1 unknown protein2223e-018
AT5G54148.1 unknown protein1839e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  33%
 
72  67%

Unigene MembersMember information