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Information for unigene UN23704
| FASTA Sequence |
| Unigene ID: UN23704 | Length: 1762 |
SSR | | GGACAATCTCGGATTCTGATACTACCCCCGACGAAACTTAATCCCCTGAGAAACCCACTTCCCAAATTCGATTCTAGTACCTGGGT
CGTCGATAATTCCTCTAAATTCCCAATCTTTCTATCTATAGCTTTCCATGGGATGGTCACTAAGAACTCTCAGAAGAGTAGTAGTA
GTAGTCAGGGCATGACCAAGCCCATGAATTTCTTTCAGAACATCATTAAACCCTTCAAACGCACCTCCAATTCCGGTCAAATTCTC
AATCTTTTCCCCTTTTTCTTTTTGGGTTTAGATTATTAGGGTTTGTAATTTTGACTCACTTTGACCAACCCCCATAGGTCTCGAAG
ACGATATCGAGAGAATCGCAGCTCTGGAGCAAAAAGTTTTCTCCTTTCAAGTCTTACTCTCAGCCACCAAAGATTTCAACCTGACC
CACAAACTCGGCGAAGGCGGATTCGGACCCGTCTTCAAGGGACGTTTACCTGACGGGAGAGACGTAGCGGTTAAGAAGCTGTCTCA
GGCTTCGAGGCAAGGGAAGAACGAGTTTGTCAACGAGGCTAAGTTGTTAGCTAAAGTCCAGCATCGGAACGTCGTTAACCTCTGGG
GTTATTGCACACATGGAGATGATAAGCTTTTGGTCTATGAGTATGTCGCAAACGAGAGCCTTGACAAGGTCCTCTTCAGTAAGTTA
TTTCTTTTGTTCTCATCTTTAATTTAGTGATAGAGATTGGTTTGTACATTAGTATTGGTTTCTCTGTTTGGGATGCAGAATCGAAT
AGGAGATCGGAGATAGATTGGAAGCAGAGGTTTGAGATCATAACAGGCATTGCTCGAGGACTGCTCTATCTCCACGAAGACGCACC
GAACTGCATCATCCACAGGGACATCAAGGCTGGTAACATTCTGCTTGATGGGAAATGGGTTCCTAAGATTGCTGATTTTGGGATGG
CCAGGCTCTTTCAGGAAGACGCGACACACGTCAACACCCGCGTCGCTGGAACCAATGGCTATATGGCGCCAGAGTATGTAATGCAC
GGTGTTCTATCGGTAAAAGCAGATGTATTCAGCTTTGGGGTTGTGGTTCTGGAGCTCGTTAGTGGCCAGAAGAACTCGAGTTTTAG
TATGAGACACCCTGACCTGACTCTTCTTGAATGGGCATATAAGTTATACAAGAAAGGGGGGACGATGGAGATACTAGACACGGAGA
TAGCAGCTTCTGCTGATCTGGAACAAGTGAGACTCTGCGTTCAGATGGGCCTTCTCTGTGTTCAAGGCGATCCTCACCAGAGACCA
GCGATGAGACGAGTAGCTATGCTTCTCACGAGAAAACCAGGACATCTAGAAGAACCAGAGCGTCCTGGTGTTCCCGGGTCTAGATA
CGGGCGTCGAAGGCATGGTCCTTCAGTAACAACATCCTCGGTTGGTACGTTATCGACACCGGGATCGAGTGCAGGTTCGTTTGGTT
CGAACTTGAAGACAAACACTGGAAGCAACACAGGGAGTGGTGGAGTTACACCGGCTTCTTCTAGGACTCCGGCTAGGAATCACGGC
ACGAGAAGTGTGGGTGGTGCGAGGTCTAGCTCAGACCCTCACGGGAAACGGCCTATGAGTTTTTAAAGTAGATAAATTCTTGTTAC
ATGATGATTGTAAATTAGTGTTATTTTTTTGGCTGTGGTAGTGATTTTAGGACAGAGCTTAGTGGTGTTGATTCTCTTCTCATGTA
AGAAACAAAAGTTCATTTATTTGTATATATTTAAATTAATGC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002888792 kinase family protein [Arabidopsis lyrata subsp. lyrata] | 1161 | 1e-124 |
| NP_177231 protein kinase domain-containing protein [Arabidopsis thaliana] | 1147 | 5e-123 |
| AAG52342 putative protein kinase; 29119-30743 [Arabidopsis thaliana] | 1147 | 5e-123 |
| NP_001185366 protein kinase domain-containing protein [Arabidopsis thaliana] | 1139 | 5e-122 |
| XP_002527785 Serine/threonine-protein kinase PBS1, putative [Ricinus communis] | 851 | 1e-088 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| C0LGH2 Probable LRR receptor-like serine/threonine-protein kinase At1g56130 | 476 | 1e-046 |
| C0LGH3 Probable LRR receptor-like serine/threonine-protein kinase At1g56140 | 467 | 2e-045 |
| C0LGE0 Probable LRR receptor-like serine/threonine-protein kinase At1g07650 | 448 | 3e-043 |
| Q9CAL3 Cysteine-rich receptor-like protein kinase 2 | 445 | 6e-043 |
| C0LGG9 Probable LRR receptor-like serine/threonine-protein kinase At1g53440 | 442 | 1e-042 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B4F7N6 At1g70740 | 1147 | 4e-123 |
| Q9CAC3 Putative uncharacterized protein F5A18.8 | 1147 | 4e-123 |
| B9SP66 Serine/threonine-protein kinase PBS1, putative | 851 | 8e-089 |
| B9HW43 Predicted protein (Fragment) | 808 | 8e-084 |
| C6ZRM6 Protein kinase family protein | 773 | 9e-080 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G70740.1 protein kinase family protein | 1152 | 5e-126 |
| AT1G56120.1 kinase | 478 | 7e-048 |
| AT1G56130.1 leucine-rich repeat family protein / protein kinase family protein | 476 | 1e-047 |
| AT1G56140.1 leucine-rich repeat family protein / protein kinase family protein | 467 | 1e-046 |
| AT1G56145.1 leucine-rich repeat family protein / protein kinase family protein | 462 | 5e-046 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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