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Information for unigene UN23721

FASTA Sequence
Unigene ID: UN23721Length: 885 SSR 
GGCCTCACGTTAATAAAACTAAAATCAAACTCTGTAATCCAAAAGAGAATTTACACAATAGCATTAACAAAACAAAAAAAGGTCTC
TCTAGTGGCAAGTGAATTTTGAAATCTTGATTAAACAAAATACCAAAAGAATCTATACAGTGCTTTTCTTTCATCCAAAAGGTTCC
ATGAACAAAGATAATGAACTTTCTTCTTGTTTGCAAGGTAACATCTTTGCTCTTGACTGAAGATATACACTTCTTTACTCAACCTT
CACCTCTGTAAGATCATCTAAAAGCTTCCTTGACGATGATGATGAACGTTTTTCTTCTTCTTCTTCTTCTTCTCGTTTCATGTCAA
CATCTTTGCCTGGCGCAGAGCACGAAGAGTCAACCCAAGGACCATCCATCGAGGACGAGCTTTTCTTTTCTCTGTCTCTCTCAAAG
GTAGAAGCCTGTGACTCGCTGTCTTGTGACAAAGGCTCAAAGGCCCTAAACCTCATTGCAGCTGCACCAGTTGGATCAGCCTCACG
TTTCACCAAAGGTGGTTCCACTTTGCTTTTCCCTTCTAACATACTCACAACAGATGACATTGGTGGTCTTAACGTCGGAGATGGGT
TTGTGCAGAGCAGAGCGATGTTCAACATCCTCTTTGCTTCTTTCTTGGAGAAGTTTGTACCGAGATCCATGTCCACAAGCTCTAGT
AGATTCCCTTGTTCTTGCAAGACATAGGCCCAATCAAGAAGGTAAACAAACTCTTCCTTTGGTCTGTAGTTCGTGTTGCTCTTCCC
GCTTACAATCTCTAAACAGACAACACCGAAGCTGTAGACGTCAGCTTTGTCTGTTAAGTAACCTCTCATTGCGTACTCTGGAGCAT
GTACCTATTGTTCTGCATCTTGTGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_175748 Leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana]8452e-088
AAF78446 Contains similarity to receptor-like serine/threonine kinase from Arabidopsis thaliana gb|AF024648 and contains multiple leucine rich PF|00560 repeats and protein kinase PF|00069 domain. ESTs gb|T04455, gb|N38129 come from this gene8452e-088
NP_001117479 Leucine-rich repeat transmembrane protein kinase [Arabidopsis thaliana]8452e-088
C0LGG8 RecName: Full=Probable LRR receptor-like serine/threonine-protein kinase At1g53430; Flags: Precursor8452e-088
NP_175749 putative LRR receptor-like serine/threonine-protein kinase [Arabidopsis thaliana]8327e-087

Swiss-Prot top hits (Blast detail)Scoree value
C0LGG8 Probable LRR receptor-like serine/threonine-protein kinase At1g534308459e-090
C0LGG9 Probable LRR receptor-like serine/threonine-protein kinase At1g534408323e-088
C0LGE0 Probable LRR receptor-like serine/threonine-protein kinase At1g076504319e-042
C0LGG7 Probable LRR receptor-like serine/threonine-protein kinase At1g534203475e-032
C0LGH2 Probable LRR receptor-like serine/threonine-protein kinase At1g561303063e-027

TrEMBL top hits (Blast detail)Scoree value
A5C3D9 Putative uncharacterized protein6183e-062
A5BSQ4 Putative uncharacterized protein6032e-060
Q8VWW7 Putative receptor-like protein kinase RLPK1 (Fragment)6004e-060
B9NBX2 Predicted protein (Fragment)5986e-060
B9NBX5 Predicted protein5978e-060

Arabidopsis top hits (Blast detail)Scoree value
AT1G53430.1 leucine-rich repeat family protein / protein kinase family protein8502e-091
AT1G53430.2 leucine-rich repeat family protein / protein kinase family protein8502e-091
AT1G53440.1 leucine-rich repeat family protein / protein kinase family protein8369e-090
AT1G07650.1 leucine-rich repeat transmembrane protein kinase, putative4319e-043
AT3G14840.2 leucine-rich repeat family protein / protein kinase family protein3701e-035

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

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