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Information for unigene UN23731
| FASTA Sequence |
| Unigene ID: UN23731 | Length: 725 |
SSR | | GGAAAGAACATTTCGAAACCCTAAATCTCCAATAAAGAGTTCGGAACCTTAACGCCGCCATGGCTAAGAAGAGAAAGCTCGAAGCG
CAACTCACCGCCGAGGCTTCTTCTGAGCCGTCGTCGCAGAAGAAGATTGCAACCAACAACAATCAGCTTAATCAGAAAGAAGTCCA
ATACGAGGAAGTAGAGGAAGAGCACGAGGAGGAAGTCGAAGATGACGACAACGATGATGACGAAGAAGAAGAAGAAGATGACAATC
GTATGGTGGTGGCGGCGGCGGCGTCGGGATCTGGGAATCATCAAGGAGATGACGACGACGACGACGAGCCGATTCAAGATCTGTTG
GAACCGTTTTCGAAGGAACAGCTTCTGAGTCTTCTCAAAGAAGCTGCGGAGAAGCATCGCGATGTGGCAAGTCGAATCCGCGAAGT
GGCTGATGAGGATCCTGTTCATAGGAAGATCTTCGTGTACGGGCTTGGATGGGATACTAAAACCGAGACGCTCCTCGAAGCTTTCA
AGCAGTACGGAGAGATCGAAGATTGCAAGGCTGTGTTTGATAAGGTCTCGGGGAAATCTAAAGGATATGGATTTATTCTGTTTAAG
TCTAGATCAGGTGCTCGTCACGCGCTTAAGCAGCCTCAGAAGAAGATCGGGAGTCGTATGACTGCGTGTCAGTTAGCTTCTAAAGG
ACCAGTCTTTGGAGGAAACAACCCTGTAGCTGCTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_567042 UBP1-associated protein 2A [Arabidopsis thaliana] | 807 | 4e-084 |
| BAH56834 AT3G56860 [Arabidopsis thaliana] | 807 | 4e-084 |
| XP_002878114 hypothetical protein ARALYDRAFT_486125 [Arabidopsis lyrata subsp. lyrata] | 804 | 8e-084 |
| BAJ33737 unnamed protein product [Thellungiella halophila] | 804 | 8e-084 |
| AAK68825 putative protein [Arabidopsis thaliana] | 802 | 1e-083 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q99020 Heterogeneous nuclear ribonucleoprotein A/B | 154 | 9e-010 |
| Q76LC6 RNA-binding protein 24 | 152 | 2e-009 |
| Q99729 Heterogeneous nuclear ribonucleoprotein A/B | 151 | 2e-009 |
| P10979 Glycine-rich RNA-binding, abscisic acid-inducible protein | 150 | 3e-009 |
| Q9BX46 RNA-binding protein 24 | 150 | 3e-009 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C0Z2A5 AT3G56860 protein | 807 | 3e-084 |
| Q9LES2 AT3g56860/T8M16_190 | 807 | 3e-084 |
| Q94B29 Putative uncharacterized protein At3g56860 | 802 | 1e-083 |
| B9S7Y1 Heterogeneous nuclear ribonucleoprotein A1, putative | 659 | 4e-067 |
| B9IHG4 Predicted protein | 652 | 2e-066 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G56860.3 UBP1 interacting protein 2a (UBA2a) | 807 | 2e-086 |
| AT3G56860.1 UBP1 interacting protein 2a (UBA2a) | 807 | 2e-086 |
| AT3G56860.2 UBP1 interacting protein 2a (UBA2a) | 807 | 2e-086 |
| AT2G41060.1 RNA recognition motif (RRM)-containing protein | 648 | 4e-068 |
| AT2G41060.2 RNA recognition motif (RRM)-containing protein | 648 | 4e-068 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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