Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN23773

FASTA Sequence
Unigene ID: UN23773Length: 930 SSR 
GGATTCTTGTGCATACCATTAAACAACTTTGTAAACAATGACATTCGTTCACCTACTCGTCTCTCTTCTCATCTGCATTACCTTCA
CGTCTTCCCTCTCCGTCGTCCCTGACCCATCAACACAAGACCTAATCAACAGAATCTGCAAACAAACAATCGACTTCAAGTTCTGT
AATAAAAGCATCACATCTCAGCTAATCAGACGACGTACCTCCATCAAGACAATAGCGAAGCTGACTGCGGCAAAAGCATGGATCAA
CGCCATAGAAACGCTTGACAACATCGAAGGCTCTCTTCTTCTCAAAGCCAAAGATCCTCGAAGCAAAGCAGAGTTTGCTGCTTGCA
GGAAAGCGTATAGATTGGTGGATGCTCATCTCGACAACGCGTTGAAGTATTTGTATCTTAAAGATTATCGGTTCATGAGAGCGTAT
CAAGCTCTTGCGCTTGTGAATATATCGATGTGTAGGACGAGTTTCTTTCACCCTACGCCTATGGTATATGCGAATTGGAATATGAG
GATATTGACAGATATAGCAATCTATGCTGGCAAGATTCTTGCTCCTCCTCCTCCTCTAAGGACCAAGACCAAGAAGAAGACGCCAT
GAGGGTCATTGTTTCGGAGTCGAAGCTTGATTTTGTTATTTCTTATTATTGAATCCAATAGTTTTTTTTCAGATTTATTCAAACAA
ATTTTTAGATTTTTATATACCGGAGATGTAAAATGCACTTCGATGGCATCATTTTTGTTTTTACTGTTACATTTCTTTATCTTGTT
TTCGTGGGTAGACATTCCTGTACTGTTGTTAATAATTCTGGCTCCATTGTAATATTTGGGCAGAAAATAGCAGAACTGTATTTTTC
GTAATGTTTTGGCAAGAAATTTCGACACACAAAACGTGTATTAGTAATTAATTATCACTATTTCAGTGTT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002875962 invertase/pectin methylesterase inhibitor family protein [Arabidopsis lyrata subsp. lyrata]8344e-087
AAG52190 hypothetical protein; 12217-12837 [Arabidopsis thaliana]8255e-086
NP_190502 invertase/pectin methylesterase inhibitor family protein [Arabidopsis thaliana]8255e-086
XP_002872111 invertase/pectin methylesterase inhibitor family protein [Arabidopsis lyrata subsp. lyrata]2942e-024
NP_197825 plant invertase/pectin methylesterase inhibitor domain-containing protein [Arabidopsis thaliana]2861e-023

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9CA10 Putative uncharacterized protein T1G12.38253e-086
Q9M3A0 Putative uncharacterized protein F2K15.1908253e-086
Q9FIN5 Emb|CAB66412.12861e-023
Q3E6X7 Uncharacterized protein At1g56620.11991e-013
O80520 At1g093701434e-007

Arabidopsis top hits (Blast detail)Scoree value
AT3G49330.1 invertase/pectin methylesterase inhibitor family protein8252e-088
AT5G24370.1 invertase/pectin methylesterase inhibitor family protein2866e-026
AT1G56620.1 pectinesterase inhibitor domain-containing protein1997e-016
AT1G09370.1 enzyme inhibitor/ pectinesterase1432e-009
AT1G09360.1 invertase/pectin methylesterase inhibitor family protein1154e-006

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
113  60%
 
62  40%

Unigene MembersMember information