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Information for unigene UN23783

FASTA Sequence
Unigene ID: UN23783Length: 1250 SSR 
GGATCATTCCCTCCAACCTCTCTCTCTCTCTCTCTCTCTCTCTCTAATTGTTTATCAGCTTCTCTCTCTCTAAATAAAGCTTTCAA
TTCAATTCTCCGTTTCTTCGTCTCTCTCTCTCTCTCTGTCACTTTTTTTCCTCTGCTTCTTTCATCTTTTGCTTCGTCTCTGAGGG
AAAGGTTGTAAATTTAACTAAAATTTTTGTAACTTTCTCATCAGATTGGATCTGGGCTTGGAGCTGAACGACGGATTTGTAAAGTG
TTCTCAATCGTTGCGGCTATTATAAGTTGGAGAGTGTGATAAAAGACTGCTAAAGTATGTCTGTTTCCATGAGAGACTTGGATCCA
GCTTTCCAAGGAGCTGGACAGAAAGCCGGTATTGAGGTATGGCGTATAGAGAATTTTAGCCCTGCACCCATCCCAAAGTCTTCTAT
TGGCAAGTTTTTCACCGGAGACTCCTACATAGTGTTGAAGACAACGGCGTTAAAAACAGGTGCATTGCGCCACGATATCCATTACT
GGCTTGGTAAAGGTACTTCTCAAGATGAAGCTGGGACTGCTGCAGTTAAGACGGTTGAATTAGATGCTGCTCTTGGAGGTCGTGCA
GTTCAATATCGGGAAGTTCAAGGCCACGAAACCGAGAAATTCTTGTCTTATTTTAAGCCATGTATCATACCTCAAGAAGATGCTAA
AGAAGGTGTGGAAGACGAAGAAGATTTACCAGCTTACCCATACGAACGTCTCAAGACGACTTCCCCTGATCCTATCACAGACATTG
ATGTAACAAGGAGAGAGGCTTACCTTTCATCAGAGGAGTTCAAAGAGAAGTTTGGTATGACGAAAGAGGCTTTCTACAAGCTGCCT
AAATGGAAACAAAACAAATTCAAGATGGCTGTTCAACTTTTCTGAGAAATGATCCATGAGACAGTGCCAGTGCATTTTAAGCTGCT
GCTTCTGCTCCCCCCATGAGAAAGCATATATAACATTTTTTTCATGGCTTGTTTTAGATAAAAAACAACCCAGAGCAGTTTTCATT
CCCTTTTGATTTTCCTCCAAATCTTTTTACCTTTATTTTCATCATCTGTTTGCATGTCTGAGTTTGATGGGCTGAGGTTAGATTTT
GAATTGCTTCCTCTTCAGGTCACAGGTTGTGGACTTTTTGAGTCTTTGATTTATTTATTCTTGTGGTTGTTTTGCTATCAAATTGA
GGAAATTTGGTTGCAAAAGATATATTTTATTTAGTGAGATTTCATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_194745 villin 4 [Arabidopsis thaliana]6196e-062
CAB43851 putative villin, fragment [Arabidopsis thaliana]6196e-062
NP_001190869 villin 4 [Arabidopsis thaliana]6196e-062
XP_002268471 PREDICTED: hypothetical protein [Vitis vinifera]5953e-059
XP_002324461 predicted protein [Populus trichocarpa]5802e-057

Swiss-Prot top hits (Blast detail)Scoree value
O65570 Villin-46192e-063
O81645 Villin-34931e-048
O81644 Villin-24751e-046
O81643 Villin-13442e-031
Q27319 Gelsolin, cytoplasmic3362e-030

TrEMBL top hits (Blast detail)Scoree value
Q541Y5 Putative villin6194e-062
A2Q391 Villin headpiece; Gelsolin region5917e-059
B9ILW2 Predicted protein5801e-057
B9N328 Predicted protein5764e-057
Q7Y0V3 Actin filament bundling protein P-115-ABP5631e-055

Arabidopsis top hits (Blast detail)Scoree value
AT4G30160.1 VLN4 (ARABIDOPSIS THALIANA VILLIN 4); actin binding6192e-064
AT5G57320.1 villin, putative5296e-054
AT3G57410.1 VLN3 (VILLIN 3); actin binding4939e-050
AT2G41740.1 VLN2 (VILLIN 2); actin binding4751e-047
AT2G29890.1 VLN1 (VILLIN-LIKE 1); actin binding / actin filament binding3442e-032

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  100%

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