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Information for unigene UN23785

FASTA Sequence
Unigene ID: UN23785Length: 1856 SSR 
GGACTCTCCTCTCCTTCTTCCCTCACTCTCTCTCTCTCTCACTCAGATCCCAACAAGCGTTCATGGAGATGCAATGAGAATCTGAT
TGCGATTCATTTTCCGATTAATATGGATTTATTCTGCGGAGAGTGTTCCTCCGGCGAATCAACGGCTGAGCTCTCATCGGAGGAAG
TTGAATCATGGCCTGATGATTCGATCGCGAGCTGCATCGAGGACGAGAGGCACTTTTTTCCAGGACTTGACTACCTCTCTAGGTTC
CACTCTCAGTCTCTCGACGCTTCCGCTAGAGAAGAGTCCGTCTCATGGATACTCAAGGTACAAGCGTATTACAGCTTCCAGCCTTT
AACGGCGTACCTCGCCGTTAACTATATGGATCGGTTTCTCTACGCTCGCCGATTACCGGAAACGAGTGGTTGGCCAATGCAGCTTT
TAGCAGTGGCGTGCTTGTCTCTAGCTGCCAAGATGGAGGAAGTTCTCGTTCCTTCTCTTTTTGATTTCCAGGTTGAAGGAGTGAAG
TATATATTTGAAGCAAAGACGATACAAATAATGGAACTTCTTGTTCTGGATGTTTTAGATTGGAGACTACGATCTGTTACACCCTT
CAGCTTCCTCAGCTTCTTTGCTTATAAGATCGATCCTCTAGGAACCTCTCTCGGGTTCTTTCTCTCCCATGCCACAGAGATTATAC
TCTCCAACATCAAAGAAGCGAGCTTTCTTGAGTATAGGCCATCGAGCATAGCTGCAGCTGCGATTCTTTGCGTAGCCAACGAGCTC
CCTTCTCTATCCTCTGTTGCAAATCCCCGCGAGAGCCCTGAGACCTGGTGCGAAGGATTAAGCAAAGAGAAAATCGTGAGATGCTA
CAAGCTGATGAAAGCAATGGCCATAGAGAATAACCGGAGAAATTCACCAAGAGTGATAGCAAAGCTTAGAGTGAGCGTAAGAGCAG
CATCCACATTGATAAGGCCAAGCGATGAATCCTCCTTCTCATCGTCATCATCATCATCCTTATCTTCTCCATCCAAAAGGAGGAAA
CTGAGTGACTACTCATGGGTAGGTGATGACAATTGACAAATCCAGCTCTGAATAAACTAAGGGGGAAATAGAGTTAATAACATATG
AAGTACATAGTTAATAATAAGTTGGGTGGTATTAAATCTAAAGAAAAAAAACATAATTAGTGGGGTTGGTGAGAGTGTTTCCATCC
AAAGGGGAAGGAATAAGAGTTTGATGAAACAGTGTTTGTTTACGACTTTTATGGGAAGGTAATATTTGGGGTTGGTTGGGAGAGAC
AATGCTCATCATTAATGACTTTGCAGATTCCCAATGAGAAGAAAGTAAAGTAAAAATAAAAGGTGAGTGAATGTAGACGACACACG
TGTGAGAAGAAGATTATGACTTTTGAGTGTGTGTGTGTGTGTGCATGTGAGAGGGAAGGGCACATGATACATTACAGTCTACAGGT
AGTGAATGGTGTTGATAAGACGGGGAGCGTATGAAAAAGAAGATTTTGAGTGAGAAGCTTGAAGATTTCAGACAGAGAGAGAAGCC
TTTGTCTTAATGGATCGCAGCAGTCTGTGGGCCCTTAGCTCCTCTCCGAGTATATACACTATTTGTTTCTTTTTTTGTGATTCGTT
TGTGTGCCGACTGCACGTGCCGGAGGCGTGTGTCGCACGTGTTTTTGTTTGTTTCTCTTCAAATCTTTTATTATTGGCGGGAAGTT
TTGTGTTTTGATTTAAATTTACATGTACCTGCTCTTACTGGGTGTTAGAGCACGGTGTTTTTTTCTCATATTATATGCATGCGTGT
AAGGCGTCACGTGAGTATATATAAATTTCTTTTTTCCATTACAAAAAAAA

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_177178 cyclin-D1-1 [Arabidopsis thaliana]13743e-149
XP_002887287 cyclin delta-1 [Arabidopsis lyrata subsp. lyrata]13653e-148
CAA58285 cyclin delta-1 [Arabidopsis thaliana]12982e-140
XP_002268394 PREDICTED: hypothetical protein [Vitis vinifera]9755e-103
XP_002312511 predicted protein [Populus trichocarpa]9657e-102

Swiss-Prot top hits (Blast detail)Scoree value
P42751 Cyclin-D1-113741e-150
Q8H339 Cyclin-D1-25952e-060
Q67V81 Cyclin-D1-15272e-052
P42752 Cyclin-D2-14922e-048
Q8LHA8 Cyclin-D2-24842e-047

TrEMBL top hits (Blast detail)Scoree value
A8Y902 D1-type cyclin9655e-102
A8Y903 D1-type cyclin9602e-101
B9SZJ0 Cyclin d, putative8689e-091
Q8GVE0 Cyclin D18177e-085
Q9SNV2 Cyclin D17683e-079

Arabidopsis top hits (Blast detail)Scoree value
AT1G70210.1 CYCD1;1 (CYCLIN D1;1); cyclin-dependent protein kinase regulator13766e-152
AT2G22490.1 CYCD2;1 (Cyclin D2;1); cyclin-dependent protein kinase regulator/ protein binding4922e-049
AT5G65420.1 CYCD4;1 (CYCLIN D4;1); cyclin-dependent protein kinase regulator4204e-041
AT3G50070.1 CYCD3;3 (CYCLIN D3;3); cyclin-dependent protein kinase4195e-041
AT4G34160.1 CYCD3;1 (CYCLIN D3;1); cyclin-dependent protein kinase regulator/ protein binding4187e-041

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
112  40%
 
201  20%
 
122  40%

Unigene MembersMember information