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Information for unigene UN23822
| FASTA Sequence |
| Unigene ID: UN23822 | Length: 545 |
SSR | | TACTCAAAAGGAAAACAATTCTTTCAGCTCATAAAATTATAACACTGAATCACACAGAGAGTCACTGACATACATATGACAAATTC
ACTAGCGTCTTCCAAAACCCGTATCGATTCAAGTTTTTACACCAAAACACAGAGTTCCCATAGATATGCTAAGAAGGAATACAATT
TCAGCAGATTTCATGCTCTTCTAAATGTTGTCTGATTTCTCCAGAGTGTAGTTGAGAAGCTTCTCAATCAGATCAACATGCGTCAT
TAGCATACGCCTGCAGCAGTATCTAAATAGGTTGAGTGCATCAAGTGCGTCCCCTTCAGTGTAGTCAAGCTGGAGAAGATCGAGAT
AAGCATCCCACTTGTTTCCAATCACCTTTCCGCATGTAAAGCATCGTACAGGGATAATCATCTTCTCGAGCAAAGAACTGCGAAAC
TGTTGACTTGGGTCTGCCTCTCTCTCTCTCTCTCTCTTTCTCGATTGGGGTTTTAGGGTTTTCTGCTTCGCGCTTTCTTTAATAAG
GTGAAGAACACAAAAGGGGGGGGGGGCCC
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| GenBank top hits (Blast detail) | Score | e value |
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| Q39290 RecName: Full=DNA-directed RNA polymerases I, II, and III subunit RPABC5; Short=RNA polymerases I, II, and III subunit ABC5; AltName: Full=ABC10; AltName: Full=DNA-directed RNA polymerase III subunit L; AltName: Full=RPB10 homolog | 354 | 6e-032 |
| NP_849640 DNA-directed RNA Polymerase II subunit L [Arabidopsis thaliana] | 343 | 1e-030 |
| NP_001148175 DNA-directed RNA polymerase II 8.2 kDa polypeptide [Zea mays] | 333 | 2e-029 |
| XP_002326311 predicted protein [Populus trichocarpa] | 329 | 5e-029 |
| NP_001152395 LOC100286035 [Zea mays] | 329 | 5e-029 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q39290 DNA-directed RNA polymerases I, II, and III subunit RPABC5 | 354 | 3e-033 |
| Q9SYA6 DNA-directed RNA polymerases I, II, and III subunit RPABC5 | 321 | 2e-029 |
| Q55AB6 DNA-directed RNA polymerases I, II, and III subunit rpabc5 | 314 | 1e-028 |
| Q32P78 DNA-directed RNA polymerases I, II, and III subunit RPABC5 | 295 | 2e-026 |
| Q6QN04 DNA-directed RNA polymerases I, II, and III subunit RPABC5 | 295 | 2e-026 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q8LFJ6 At1g11475 | 343 | 8e-031 |
| C0PFY7 Putative uncharacterized protein | 333 | 1e-029 |
| A9PF10 Predicted protein | 329 | 3e-029 |
| B6UDG2 DNA-directed RNA polymerase II 8.2 kDa polypeptide | 329 | 3e-029 |
| B4FJG4 DNA-directed RNA polymerase II 8.2 kDa polypeptide | 328 | 4e-029 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT1G11475.1 NRPB10; DNA binding / DNA-directed RNA polymerase | 343 | 6e-033 |
| AT1G61700.1 DNA-directed RNA polymerase II, putative (RPB10) | 321 | 2e-030 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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