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Information for unigene UN23824
| FASTA Sequence |
| Unigene ID: UN23824 | Length: 1246 |
SSR | | GGGGAGAAAAAGGGATAATGGCATAATGCTCTTGTGAGAGAGCAGAGAGAGAGAGCGGGGCTAGCACGAACGAACAAGAAGAATCT
TTCTTTCTTCGTCGAACATTTGTCTTTGTCTTCCATCTCAATCGAATCTCTCCGTCACCGTCTCCGCCGTTTTGAGAGGAGGGTTA
TGGATGTTTCAGCTAGGAAGTCTCAGAAAGCAGGACGTGAAAAGTTGAGGAGGGAGAAACTTAATGAGCATTTTGTTGAACTTGGC
AATGTACTCGATCCAGAAAGACCCAAGAATGACAAAGCTACCATTCTCACTGATACTCTTCAGTTGCTCAAAGACCTCACTTCTGA
AGTCACCAAACTCAAATCTGAGTACACCGCTTTGACTGATGAGTCCCGCGAGCTGACACAGGAGAAAAACGACCTGAGAGAAGAAA
AGACATCGCTCAAATCAGATATAGAGAATCTCAATCTCCAGTACCAGCAGAGATTAAGGTCAATGTCTCCGTGGGGAGCTGCGATG
GATCACACCGTCATGATGGCTCCACCACCTTCTTTTCCATATCCGATGCCTATGGCTATGCCTCCCGGTTCAATCCCAATGCATCA
TCATCCACCTATGCCATCTTACACTTACTTTGGCAACCAGAACCCTAGCATGATGCCAGCGCCTTACATGCCCTATATGCAGCCTC
CTAATACCGTCGTTGAGCAACAATCCGTGCACATACCACAGAACAACCGTTCCAGGGAACCTAGAACAAAGGTTTCAAGAGAGAGC
AGGTCCGATAAAGCAGAGGACTCTAATGACGTGGCAACACAACTCGAGTTAAAAACTCCTGGATCTACGTCTGATAAGGATACATT
ACAAAGGCCAGAGAAGAGCAAGAGATGTAAGAGAAACAGCAACAACAACAACTCTGTGGAAGAAAGCTCTCACTCAAGCAAGTGTT
CATCTTCTCCGAGCGTCCGAGACAACACTTCTTCCAGTAGCGTAGCTGGTGGCCTAAAACCTGATGATGCAAAATGAGGATTGAGT
ATATGATGCGACTACAAAACGGTTAAACATCGTTCTGATGCCTTAGTTCTACAAACGCAGCTGATTTGTAATCTCTCTTGTAATGT
TTATAGTTGTATAACATTTAATAAGAGGTTTATATTCAAATTAGGCCAACTTTCATTAAAGCTAAATAACACATTGTAACAAAATA
GCGCCATAAAATCAATCATTCAATAAACTATAAAAAGTTACA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_001030729 transcription factor bHLH121 [Arabidopsis thaliana] | 1344 | 5e-146 |
| NP_188620 transcription factor bHLH121 [Arabidopsis thaliana] | 1328 | 3e-144 |
| XP_002885338 basic helix-loop-helix family protein [Arabidopsis lyrata subsp. lyrata] | 1319 | 4e-143 |
| XP_002529247 DNA binding protein, putative [Ricinus communis] | 772 | 1e-079 |
| XP_002265960 PREDICTED: hypothetical protein [Vitis vinifera] | 707 | 4e-072 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LT23 Transcription factor bHLH121 | 1344 | 2e-147 |
| Q8W2F2 Transcription factor bHLH11 | 368 | 3e-034 |
| Q8L467 Transcription factor bHLH104 | 224 | 2e-017 |
| Q9LTC7 Transcription factor bHLH34 | 209 | 8e-016 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9DHF5 AT3G19860 protein | 1344 | 3e-146 |
| B9STC8 DNA binding protein, putative | 772 | 7e-080 |
| B9HRA9 Predicted protein (Fragment) | 692 | 1e-070 |
| B9H151 Predicted protein | 678 | 6e-069 |
| B9S6N8 DNA binding protein, putative | 677 | 7e-069 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G19860.2 basic helix-loop-helix (bHLH) family protein | 1345 | 1e-148 |
| AT3G19860.1 basic helix-loop-helix (bHLH) family protein | 1329 | 1e-146 |
| AT4G36060.1 basic helix-loop-helix (bHLH) family protein | 368 | 3e-035 |
| AT4G36060.2 basic helix-loop-helix (bHLH) family protein | 368 | 3e-035 |
| AT4G14410.1 basic helix-loop-helix (bHLH) family protein | 224 | 1e-018 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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