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Information for unigene UN23861
| FASTA Sequence |
| Unigene ID: UN23861 | Length: 445 |
SSR | | GGGAGACACGTCTCTCTCTCTCTCTCGTCTCTTCGCTCGTGTTCGAGATACATTGCATAAACCCTAGTTCTCCAGAAACCTAAGCT
TTGTCCGATTCGAGTGGATAATAATGGATCAACAACCAGAACCAGTTACTTACGTCTGCGAAGATTGTGGACAAGAAAACACTTTG
AAGTCAGGGGATGTGATCCAATGCAGAGAGTGTGGCTACCGTATTCTCTACAAGAAGCGTACCCGTAGAGTTGTCCAGTACGAAGC
TCGCTGAGAACCACAACTCACCCCGAAAGATGATTTGAAAGTCTGTTAAGATGTCATAAAGGCTTTTCCTGCCTATGTTTTGTAAT
ATAATTCAAACTCCACTTGAAATTCTTTTTCTTGTTTTTGTTTGATTTGGTTAACAATGAGTGTCACTTTATAACCCATTATTGGC
TACATCTCTTGCTCC
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| GenBank top hits (Blast detail) | Score | e value |
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| NP_198917 DNA-directed RNA Polymerase II subunit K [Arabidopsis thaliana] | 260 | 2e-021 |
| XP_002267800 PREDICTED: hypothetical protein [Vitis vinifera] | 255 | 9e-021 |
| XP_002870659 predicted protein [Arabidopsis lyrata subsp. lyrata] | 251 | 3e-020 |
| XP_002317630 predicted protein [Populus trichocarpa] | 250 | 3e-020 |
| XP_002264322 PREDICTED: hypothetical protein isoform 2 [Vitis vinifera] | 247 | 7e-020 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q3ZBC0 DNA-directed RNA polymerases I, II, and III subunit RPABC4 | 167 | 1e-011 |
| P53803 DNA-directed RNA polymerases I, II, and III subunit RPABC4 | 167 | 1e-011 |
| Q63871 DNA-directed RNA polymerases I, II, and III subunit RPABC4 | 167 | 1e-011 |
| P48011 DNA-directed RNA polymerases I, II, and III subunit RPABC4 | 167 | 1e-011 |
| Q54R66 DNA-directed RNA polymerases I, II, and III subunit rpabc4 | 137 | 3e-008 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9FLM8 DNA directed RNA polymerase II polypeptide K | 260 | 2e-021 |
| B9I0K5 Predicted protein | 250 | 2e-020 |
| C6T1P2 Putative uncharacterized protein | 250 | 2e-020 |
| B6SPH6 DNA-directed RNA polymerases I, II, and III 7.3 kDa polypeptide | 242 | 2e-019 |
| B8A9M5 Putative uncharacterized protein | 242 | 2e-019 |
| Arabidopsis top hits (Blast detail) | Score | e value |
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| AT5G41010.1 NRPB12; DNA binding / DNA-directed RNA polymerase | 261 | 1e-023 |
| AT1G53690.1 DNA-directed RNA polymerases I, II, and III 7 kDa subunit, putative | 166 | 1e-012 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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