 |
Information for unigene UN23882
| FASTA Sequence |
| Unigene ID: UN23882 | Length: 890 |
SSR | | GGACACACAACACTTAACACTTTAATCACACATCACCAACTGGTCTCTCTCATACCAATCTAACCAAATGGGTTCTTATTCTACAC
CTCAAGAAGAGCCTCAACTAGTAGATACACCTGATATTGTTCCTTCTCCGATAGCTCAGGAACCGGACAACGATGTACCGGCCCCG
GGAAATCAGTTTGCTGAGTTCGCCGCCGGTTGTTTCTGGGGGGTGGAGCTTGCTTTCCAGAGGATTCCTGGTGTGACAGAGACTGA
GGTTGGGTACACTCAGGGGATCTCTCACAATCCTTCTTACAAGGATGTCTGCACCAACACAACGAACCATGCAGAGGTTGTAAGGG
TCCAGTATGATCCCAACGAGTGCATCTATGAGACTCTGCTTGACTTGTTCTGGTCTAGGCATGATCCCACCACCTTAAATCGTCAG
GGAAAACTTGTGGGAGCTCAGTACAGATCAGGTATATACTTCTACACACCAGAGCAAGAGAGGCTGGCACGTGAATCTCTGGAGAC
TCAGCAGAAGAAACTAGAGAAGAAGATTGTGACTGAGATATTACCGGCCAAGAAATTCTACAAAGCTGAGGAATACCATCAGCATT
ACCTCTCTAAAGGTGGGACGAGTGGCCATGCACAGTCCCCTGCAAAGAGCTGCAAAGACCCTATCAGCTGCTTTGGCTAAGGAAAA
ACATTTGTTCCTCTTCACCCAAACAGAGGATTCTCTGAGGTTTCGTATCAGTTTTTTTTGTGTGTGTGTGTGTGTATGTGCCTGCG
TGTGTGTGTGTGTTGATTTTTAAGTCTCAGTTAGTAATAAAGATGCATGTGGGATCATCTCAACTGTGTAAGTGTAACTTGTCTTA
GTTTCTAAACTTTGAACTGATGTTTGTTTG
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| AAR13689 peptide methionine sulfoxide reductase [Brassica oleracea] | 1046 | 1e-111 |
| AAR15485 peptide methionine sulfoxide reductase [Arabidopsis arenosa] | 944 | 7e-100 |
| AAR15471 peptide methionine sulfoxide reductase [Olimarabidopsis pumila] | 943 | 9e-100 |
| NP_196363 peptide methionine sulfoxide reductase A2 [Arabidopsis thaliana] | 938 | 3e-099 |
| XP_002873309 peptide methionine sulfoxide reductase [Arabidopsis lyrata subsp. lyrata] | 923 | 2e-097 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q9LY15 Peptide methionine sulfoxide reductase A2 | 938 | 2e-100 |
| Q9LY14 Peptide methionine sulfoxide reductase A3 | 778 | 6e-082 |
| Q9FKF7 Peptide methionine sulfoxide reductase A1 | 771 | 4e-081 |
| P54150 Peptide methionine sulfoxide reductase A4, chloroplastic | 744 | 5e-078 |
| Q9SEC2 Peptide methionine sulfoxide reductase | 740 | 1e-077 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q6V5K8 Peptide methionine sulfoxide reductase | 1046 | 7e-112 |
| Q6V5D2 Peptide methionine sulfoxide reductase | 944 | 5e-100 |
| Q6V5E6 Peptide methionine sulfoxide reductase | 943 | 6e-100 |
| Q6V5E5 Peptide methionine sulfoxide reductase | 796 | 7e-083 |
| C6TLL9 Putative uncharacterized protein | 794 | 1e-082 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G07460.1 PMSR2 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 2); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / peptide-methionine-(S)-S-oxide reductase | 939 | 1e-101 |
| AT5G07470.1 PMSR3 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 3); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / peptide-methionine-(S)-S-oxide reductase | 779 | 4e-083 |
| AT5G61640.1 PMSR1 (PEPTIDEMETHIONINE SULFOXIDE REDUCTASE 1); oxidoreductase, acting on sulfur group of donors, disulfide as acceptor / peptide-methionine-(S)-S-oxide reductase | 772 | 2e-082 |
| AT4G25130.1 peptide methionine sulfoxide reductase, putative | 745 | 3e-079 |
| AT2G18030.1 peptide methionine sulfoxide reductase family protein | 262 | 3e-023 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
