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Information for unigene UN23906

FASTA Sequence
Unigene ID: UN23906Length: 889 SSR 
GGATTGTTTCTAGCCAATGGCTTCCTCCGCTCTTATCCTCCGACCTTTCTTCTCTTCACTCACTCAAACCTGTCAAGCACCAATCT
CCGCTCGAACTTCCGACCACCATCCACACACTCTCTCACGTCGCGACGCACTCTCTCTCTCCTCCGCTTCTCTCCTCCTCTTCTCT
CTCTCTCCAACCGATCCAGCTCTCGCCTTCGGAATCTCAGGACCAAAGGAATGGTTGAAAGATCAGAAGAAGAAGTCGTCGAGGTT
CTTGTTAGCTCCCATTGATGCTTCTCGCGAAAGCCTCCGCTCTGTTTATCTTTCTCTCTCAACTAGAGAATCTGATTATACGGACA
AAGATTTGGAGAGCCTTCAGAACCTGTTGAGGTCTTCTGCAAGAGATTGTGTTCCTAAAGAGAGAAGCTCTCTTGTCGATTTTCAG
TCTAAAACCGGAGTGGAGGTTTGCACATTCAAGCTTGTTCTGAAGAATGCTGCTTCGTTGCTAGATGATAAGGACCCAGTCATTCT
TGAAGCAGAGAACATACTAAATGATCTTGTTAGGTCATTTGGTTCTCTCATCGTGCTTACGAATGGGATTGATATGAATCTTCCTT
CTGATAGAAAAAAGATTGCGGATGCAGTTATGGAGTCGATCTCTGTTCTTGACAAGTTTGAGAAGAGTGTCAAGGACTGCCTTGAG
ATCTGAGAGATGGAGTGTGTCTGTTCTTCTCTTCTTGAAAGCAGTGTGGAATAAATAGCTGTTTAGGGGGTACCAGCGTTTTGTTA
TAATTTGTGGAAAGTGAGAGGCAACATCTCTTTTTATATGTAAAATAATCCCCTTTTGTTCAAGCAGTTTAGTCTGTATGATCTCG
CATCCATTCCTGAAAAATTCATTTAGACC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_568612 uncharacterized protein [Arabidopsis thaliana]8237e-086
XP_002863738 hypothetical protein ARALYDRAFT_494744 [Arabidopsis lyrata subsp. lyrata]8221e-085
AAM65999 unknown [Arabidopsis thaliana]8202e-085
XP_002281439 PREDICTED: hypothetical protein [Vitis vinifera]5754e-057
XP_002320631 predicted protein [Populus trichocarpa]5692e-056

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8L9F4 Putative uncharacterized protein8201e-085
B9IBG3 Predicted protein5691e-056
C6TLM7 Putative uncharacterized protein5629e-056
C6T537 Putative uncharacterized protein5521e-054
C6SX97 Putative uncharacterized protein5377e-053

Arabidopsis top hits (Blast detail)Scoree value
AT5G42765.1 INVOLVED IN: biological_process unknown; LOCATED IN: thylakoid, chloroplast thylakoid membrane, chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Twin-arginine translocation pathway signal (InterPro:IPR006311); Has 13 Blast hits to 13 proteins in 4 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).8242e-088

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
83  60%
 
92  40%

Unigene MembersMember information