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Information for unigene UN23930
| FASTA Sequence |
| Unigene ID: UN23930 | Length: 815 |
SSR | | GGGGTTGCAAATCGAAATCGGATTTGGACAAACCCTAGAAACCGGCGAGAGAGAGAGAGAGAGAGAGAGAGGTGGAATCATTCTGG
GGTCGAGAGGATGAAGAGCGATTGGTTTAACTTGCATCAGGTCTCCTTCTCTCTTTCCAGTTTTCTTATTTCGATCTTTGACATCT
TATGCCCCCACAAACTTTGCAGATAGCGAGAAACTCATTCATAGCAACATCAACCGTGTACGCTTCCACCGAATTCAACTTCTCAA
ACACTGATCGAAGAAGCTTCTGCTTTTACGCACGAGACAGATCTGGCTTTGTCGTGTTGAAATCGGAGAAGGAGTTTAACAATGCA
CTGAGCAAAGCTCGAGATGGATCTTTGCCGTCGGTTTTTTACTTCACTGCTGCGTGGTGTGGACCTTGCGGGCTTATCGCTCCTGT
TATCTTGTAGCTCAGTAATAAATATCCTCATGTTACTACATACAAGGTCGACATTGATGAGGGCGGTCTTTCAAATGCTCTTGGGA
AGTTAAACGTTTTTGCTGTGCCAACAATGCAATTCTTCAAGGGGGCGTGAAGAAAGCAGAGCTTGTAGGTGCAGATGTCATTAAGC
TGAGGAGTATCATGGAACATCTCTACAAGTGAGAGACACTCCGTCACATTTTTATTTTTTTGTTTTCTTGCGCTGCATCCAAGTAA
TGCACCAAGTGATTACGAACAAGGAAAAAAAAAAAACTTTGCTACGATCGTTATGGAGACTCACTGTCTCAAGCATTTATTTATCA
ATGTACATAATTTATGTGATTTTTTTCAAACAAGTTTCATC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_564371 thioredoxin O2 [Arabidopsis thaliana] | 522 | 5e-051 |
| XP_002890921 hypothetical protein ARALYDRAFT_473345 [Arabidopsis lyrata subsp. lyrata] | 518 | 1e-050 |
| AAF98203 F17F8.6 [Arabidopsis thaliana] | 480 | 4e-046 |
| NP_181046 thioredoxin O1 [Arabidopsis thaliana] | 418 | 6e-039 |
| XP_002879529 hypothetical protein ARALYDRAFT_482466 [Arabidopsis lyrata subsp. lyrata] | 399 | 9e-037 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q93VQ9 Thioredoxin O2, mitochondrial | 522 | 2e-052 |
| O64764 Thioredoxin O1, mitochondrial | 418 | 3e-040 |
| Q655X0 Thioredoxin O, mitochondrial | 225 | 6e-018 |
| Q0D840 Thioredoxin H1 | 156 | 6e-010 |
| A2YIW7 Thioredoxin H-type | 156 | 6e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| C6T1X0 Putative uncharacterized protein | 290 | 3e-024 |
| B9T881 Thioredoxin I, putative | 280 | 4e-023 |
| B9MUN0 Thioredoxin o | 278 | 7e-023 |
| Q257C6 Putative thioredoxin | 256 | 2e-020 |
| C5Z7N0 Putative uncharacterized protein Sb10g026630 | 238 | 3e-018 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G31020.1 ATO2 (Arabidopsis thioredoxin o2) | 522 | 2e-053 |
| AT2G35010.1 ATO1 (Arabidopsis thioredoxin O1) | 418 | 2e-041 |
| AT2G35010.2 ATO1 (Arabidopsis thioredoxin O1) | 418 | 2e-041 |
| AT3G51030.1 ATTRX1; oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 138 | 7e-009 |
| AT1G45145.1 ATTRX5; oxidoreductase, acting on sulfur group of donors, disulfide as acceptor | 126 | 2e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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