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Information for unigene UN23954

FASTA Sequence
Unigene ID: UN23954Length: 1014 SSR 
GGGCATCACTGTGAGAGCCTTGGCGGTTATTAACCCTGGTAACCCAACAGGACAGGTTCTTTCAGAAGAAAACCAGCGTGACATTG
TTGACTTCTGTAAGAAAGAGGGCTTGGTTCTTTTAGCTGATGAAGTTTATCAGGAAAACGTGTACGTCCCTGACAAAAAGTTCCAC
TCTTTCAAGAAAGTGGCCCGGTCTATGGGCTACGGTGAGAAGGATATCTCCTTAGTCTCGTTCCAATCTATCTCCAAAGGATATTA
TGGAGAGTGTGGGAAGAGAGGAGGTTACATGGAGGTGACTGGTTTCACTTCTGATGTAAGAGAACAGATATACAAAGTGGCTTCTG
TGAATCTTTGCTCCAACATCTCTGGTCAGATTCTTGCCAGCCTCGTCATGAGCCCACCCAAGCCTGGTGATGAGTCGTACGAGTCA
TACATAGCAGAGAAAGAAGGGATTCTCTCGTCTATGGCAAGACGTGCGAAGACACTTGAAGAAGGTCTGAAAAAGTTGGAGGGTAT
AACATGCAATAGAGCAGAGGGAGCTATGTATCTGTTCCCTTGCATTAAACTTCCACAAAAGGCGATTGCGGCTGCAGAAGCTGCAA
AGACTTCACCGGACACTTTCTACTGCAAACGCCTTCTAAACGCTCCGGGAATAGTCGTAGTCCCTGGTTCTGGATTTAGACAGGTA
CCGGGAACATGGCATTTCAGGTTGACGATACTTCCTCAAGAAGATAAGATACCGGCAATCGTGAACCGTGACTGAGTTCCACAAGA
GCTTCATGGATGAGTTCCGCAACTAAAGGGGATACTGTTTCTAAGACGTGATTAGTCTTTTTGAGTAATAATAATAATAAGAAAAA
GGGATTCTGTCTCTTCGTCAGACATTTGTGTTAAGATGCTTGCGAGAGCATCTTTAGTCTCTTCTTATTCAGCTTTTGTGTTGCTC
TTTTATATTGGGCTGATAGTGAGTGATAAAACTACCATAAATTTCTATTGAGAAGAGTTCTTATATGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002890217 alanine aminotransferase [Arabidopsis lyrata subsp. lyrata]12181e-131
AAF82782 alanine aminotransferase [Arabidopsis thaliana]12153e-131
NP_173173 alanine aminotransferase [Arabidopsis thaliana]12136e-131
AAF79891 Strong similarity to alanine aminotransferase from Zea mays gb|AF055898. It contains an aminotransferases class-I domain PF|00155. ESTs gb|AV546814, gb|AV519234, gb|AV536176, gb|AV537339, gb|AV544878, gb|AV532954, gb|AV553416, gb|AV519356, gb|AV537898, gb|AI999107, gb|AV545731, gb|AI995660, gb|AV550634, gb|AV536556, gb|AV531066, gb|T45832, gb|AV549979, gb|T04047, gb|AV549129, gb|T88429 and gb|AI993829 come from this gene. This gene is cut off [Arabidopsis thaliana]12136e-131
AAK64147 putative alanine aminotransferase [Arabidopsis thaliana]12136e-131

Swiss-Prot top hits (Blast detail)Scoree value
P52894 Alanine aminotransferase 210376e-112
P34106 Alanine aminotransferase 210287e-111
Q54MJ7 Probable alanine aminotransferase, mitochondrial7365e-077
Q8BGT5 Alanine aminotransferase 26756e-070
Q6NYL5 Alanine aminotransferase 2-like6585e-068

TrEMBL top hits (Blast detail)Scoree value
Q9LKJ4 Alanine aminotransferase12152e-131
Q94BP8 Putative alanine aminotransferase (Fragment)12134e-131
Q9LN15 T13M22.3 protein (Fragment)12134e-131
Q94C83 Putative alanine aminotransferase (Fragment)11803e-127
Q9LDV4 Alanine aminotransferase11803e-127

Arabidopsis top hits (Blast detail)Scoree value
AT1G17290.1 AlaAT1 (ALANINE AMINOTRANSFERAS); ATP binding / L-alanine:2-oxoglutarate aminotransferase12132e-133
AT1G72330.1 ALAAT2 (ALANINE AMINOTRANSFERASE 2); ATP binding / L-alanine:2-oxoglutarate aminotransferase11801e-129
AT1G70580.1 AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); L-alanine:2-oxoglutarate aminotransferase/ glycine:2-oxoglutarate aminotransferase7123e-075
AT1G70580.2 AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); L-alanine:2-oxoglutarate aminotransferase/ glycine:2-oxoglutarate aminotransferase7123e-075
AT1G70580.3 AOAT2 (ALANINE-2-OXOGLUTARATE AMINOTRANSFERASE 2); L-alanine:2-oxoglutarate aminotransferase/ glycine:2-oxoglutarate aminotransferase7123e-075

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
101  50%
 
71  50%

Unigene MembersMember information