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Information for unigene UN23980

FASTA Sequence
Unigene ID: UN23980Length: 990 SSR 
GGACAAGACAGTCAGACAGATCAGGAACAGCTTAGACTCGCAGAGAGAGAGAGAGAGAGAGAGAGAGAAAAACACCGTCGTTCTTC
TTCCACCCACAGAACATAACCAGAGATCGTAGAATCTATCTATCTCTCTCTTCTAGGTCCGATTCGATGCCGTCCCGTAGGCGTAC
CCTCCTCAAAGTCATCATCCTCGGCGATAGCGGGGTGGGGAAGACCTCTCTGATGAATCAATATGTTAATAAAAAGTTCAGCAACC
AGTACAAAGCCACCATTGGAGCTGACTTCTTGACTAAGGAAGTCCAGTTTGAAGATCGTCTTTTCACTTTACAGATCTGGGATACG
GCTGGGCAAGAAAGGTTTCAGAGCCTTGGTGTAGCTTTTTACCGGGGTGCTGATTGCTGTGTTCTTGTATATGATGTCAACTCCAT
GAAATCTTTTGAAAATCTCAATAACTGGAGAGAAGAGTTTCTGATCCAGGCGAGTCCATCGGATCCAGAGAACTTTCCATTTGTTC
TTATCGGAAACAAGGTGGACGTGGATGGTGGAAACAGCAGAGTTTCAGAGAAGAAGGCTAAAGCTTGGTGTGCGTCAAAGGGAAAC
ATTCCCTACTTTGAAACCTCTGCTAAGGAAGGCACCAATGTTGAGGAAGCTTTCCAATGCATTGCCAAGAACGCTCTGAAGAGCGG
GGAAGAGGAAGAGCTATACTTGCCGGACACAATCGATGTCGGGACAAGCAATCAGCAGAGGTCTACAGGGTGTGAATGCTAGGGAG
AGTCTCTCTCCCAGAAGAATGCTTTTGAGTTCAAACAACGGGGGGAACGTGTCTCTCCTCCTATCACCTCTCTTCTTCGCCAGTTA
TCCCTAAACTTTTATTATATTACATCGCTGTAAATTTGTTCTTTTGTGGGCTAAGAGAATCCTTCAAAATGATTTGACTTGTCTAG
CAAGTATTTGTGTTTTAATTATATTATAAAAACATATTTCCTCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
ABK15561 small GTPase Rab2 [Capsicum annuum]9502e-100
XP_001828916 RAB small monomeric GTPase [Coprinopsis cinerea okayama7#130]7942e-082
XP_001873286 predicted protein [Laccaria bicolor S238N-H82]7933e-082
P36864 RecName: Full=GTP-binding protein yptV57881e-081
XP_003037096 hypothetical protein SCHCODRAFT_72805 [Schizophyllum commune H4-8]7871e-081

Swiss-Prot top hits (Blast detail)Scoree value
P31022 Ras-related protein Rab710062e-108
Q40787 Ras-related protein Rab79686e-104
O24461 Ras-related protein Rab79623e-103
Q9XER8 Ras-related protein Rab79444e-101
P93267 Ras-related protein Rab7A9175e-098

TrEMBL top hits (Blast detail)Scoree value
A0FCQ6 Small GTPase Rab29501e-100
A8N217 Putative uncharacterized protein7941e-082
B0CQR2 Predicted protein7932e-082
Q870G4 Ras-related protein Rab77852e-081
D5KY34 Rab77644e-079

Arabidopsis top hits (Blast detail)Scoree value
AT3G18820.1 ATRAB7B (ARABIDOPSIS RAB GTPASE HOMOLOG G3F); GTP binding10465e-114
AT1G49300.1 RABG3E (RAB GTPASE HOMOLOG G3E); GTP binding10026e-109
AT1G49300.2 RABG3E (RAB GTPASE HOMOLOG G3E); GTP binding10026e-109
AT1G52280.1 AtRABG3d (Arabidopsis Rab GTPase homolog G3d); GTP binding9363e-101
AT3G16100.1 ATRABG3C (ARABIDOPSIS RAB GTPASE HOMOLOG G3C); GTP binding9363e-101

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
113  75%
 
81  25%

Unigene MembersMember information