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Information for unigene UN24038

FASTA Sequence
Unigene ID: UN24038Length: 839 SSR 
GGGGCTTCTTCTCGTCGTTCGTCATTCTGACACTCATCTTTCTTCTCCCCGCTTGCCTTGCCTGCCTGCCTTAAGATCTCTTTCTC
AATCAATATATCTATTTGCCTGTTTCTTCTACAAGCTCAGAAAGACAGAAGAAGCTTTCATCTTCTTTTTTTGTTGAAGAATGGAG
AATGGTGGGCAGTATGCAAATGGGTCTGATTACTTAAAAGGAGCAAACTCTATGTGGAATATGCTACCTCACCATCAGATCAAAGA
GCAACACAATGCCTTGGTCATGAACAAAAAGATCATGTCCATCCTCGCCGAAAGAGACGCCGCTGTTCACGAAAGAAACCAAGCTG
TCTCCGCCAAATTGGAAGCCGTCGCAGCTCGAGACCAAGCCCTTCAGCAGCGGGACAAAGCCCTGGCCGAAAGAGATAAAGCTTTG
ATTGAGAGGGACAATGCTCTCGCTGCCCTTCAGCACCATGAAAACAGTCTCAACTTTGCTATGTCCGGTGGTGGTAAGCGCTATCA
AGGGGATGACGATGGTTTCACTCTTGATGATGTCTGCCCTACTACTACTACTACATCAACTAACACGACCAAGGCAATCAAAAGGA
AAAAAGGAAAGAAAGTGGGTGAAGATCTGAACCTTCTGGTTGCTTCTCCTGGAAAGAAATGTAAAAAAGATTGGGACACTAACCAT
TTCGGTTTAAACTTGGTCACCTTCGACGAGAAGACTATGCCCGTGCCGGTTTGCACGTGCACAGGCGCTGCGCATCAGTGTTACAA
ATGGGGGAATGGTGGATGGCAATCGTCTTGCTGCACGACCACCTTGTCGCAGTACCCATTACCGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002880369 ATBPC4/BBR/BPC4/BPC4 [Arabidopsis lyrata subsp. lyrata]8821e-092
NP_565503 basic pentacysteine 4 [Arabidopsis thaliana]8461e-088
AAR25824 basic pentacysteine 4 [Arabidopsis thaliana]8372e-087
CAB38811 putative protein [Arabidopsis thaliana]6614e-067
ABU63289 GAGA-motif binding transcriptional activator [Arabidopsis thaliana]6543e-066

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q8S8C6 AT2G21240 protein8461e-088
Q6U1M9 Basic pentacysteine 48371e-087
Q9SVK1 Putative uncharacterized protein AT4g389106792e-069
B9HRE8 Predicted protein (Fragment)6514e-066
B2Z456 GAGA-binding transcriptional activator BBR/BPC4-like4023e-037

Arabidopsis top hits (Blast detail)Scoree value
AT2G21240.1 BPC4 (BASIC PENTACYSTEINE 4); DNA binding / transcription factor8466e-091
AT2G21240.2 BPC4 (BASIC PENTACYSTEINE 4); DNA binding / transcription factor8466e-091
AT4G38910.1 BPC5 (BASIC PENTACYSTEINE 5); DNA binding / transcription factor6262e-065
AT5G42520.1 ATBPC6; DNA binding / transcription factor2472e-021
AT5G42520.2 ATBPC6; DNA binding / transcription factor2472e-021

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
121  50%
 
211  50%

Unigene MembersMember information