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Information for unigene UN24043
| FASTA Sequence |
| Unigene ID: UN24043 | Length: 1273 |
SSR | | GGAGGAGAGAAAGTGAGAAAGTCCTCCAGAGTTGGTTCCTAATTAGACTCCACTTTTGCCTCGCTATTTGTTTATTTTTAGCTCTT
CTTCTTGTGAATGTGAGGGACTCCGAATGTGAGAGAGAGAAGTAGATAGATAGATCCGCTCGATATTTTACTTTTGCTGGTTTCAA
TTGACTCGTGAATCAGCCAATTTTTCTCGAGAAAGATTTAGGGAGAGAGAGAGAGATCCGAGGAATCTAGAGATGTCAGGTCCACT
TGATCGATTCGCAAGACCATGTTTCGAGGGGTTGTTGAGCAGTGATGAGAAGAAGGAACGCAAGTCCGACTTTGAGAACTCTGAGG
ACGAGAGGAGGACCAGGATTGGTTCTCTGAAGAAGAAGGCGATCAACGCGTCTACCAAGTTCAAGCACTCTCTCAAGAAGAAGAGC
GGGAGAAGAAAGAGCGATGGACGGGTGAGCTCTGTCTCCATCGAGGATGTGAGGGATGTCGAGGAGCTCCAGGCCGTAGATGCGTT
TCGGCATGCCTTGTTGATCGACGAGCTGCTTCCGAGTAGACATGATGACTACCACATGATGCTGAGGTTCTTGAAGGCGAGGAAGT
TCGACGTTGAGAAAGCGAAACACATGTGGTCTGATATGATTCAGTGGAGGAAAGAGTTTGGCACTGACACTATTCTTCAGGATTTT
GATTTCGAAGAGATCAATGAGGTTTTGAAGTATTACCCACACGGTTATCACGGTGTTGATAAAGAAGGCAGACCCATTTACATTGA
AAGGCTGGGGAAAGTTGATCCTAACAGACTCATGCAAGTTACAAGCATGGATCGATATGTGAGATATCATGTTAAGGAGTTTGAGA
GGAGCTTTATGATCAAGTTTCCTTCCTGTACTATTGCTGCAAAGAAGCATATTGACTCCAACACAACTATTCTAGATGTTCAGGGA
GTGGGATTGAAAAACTTTACCAAGTCTGCTCGGGAGCTTATAACGCGATTACAAAAGATCGACGGAGACAATTATCCTGAGACTCT
CCACCAAATGTTTATCGTCAATGCAGGGCCTGGATTTAGGCTGCTCTGGAATACTGTGAAGGGGTTTATAGACCCCAAAACATCTT
CTAAAATTCATGTCCTTGGATACAAGTACCAGACCAAACTGCTTGAAGTGATTGATGCCAACGAGTTGCCTGAGTTCTTGGGAGTG
CTTGTACTTGCGCGGATCAAGGGGTTGCATGCTTTCTGACAAGGGACCTTGGAAAACCCGAATTGCGAA
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_179747 sec.4-like phosphatidylinositol transfer protein [Arabidopsis thaliana] | 1564 | 2e-171 |
| NP_001118356 sec.4-like phosphatidylinositol transfer protein [Arabidopsis thaliana] | 1539 | 1e-168 |
| XP_002866832 hypothetical protein ARALYDRAFT_912374 [Arabidopsis lyrata subsp. lyrata] | 1502 | 2e-164 |
| NP_568054 Sec14p-like phosphatidylinositol transfer family protein [Arabidopsis thaliana] | 1493 | 3e-163 |
| AAK59767 AT4g39170/T22F8_70 [Arabidopsis thaliana] | 1493 | 3e-163 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q10137 Sec14 cytosolic factor | 439 | 2e-042 |
| P45816 SEC14 cytosolic factor | 436 | 4e-042 |
| P24280 SEC14 cytosolic factor | 431 | 2e-041 |
| P46250 SEC14 cytosolic factor | 423 | 1e-040 |
| P53989 SEC14 cytosolic factor | 421 | 2e-040 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B3H588 Uncharacterized protein At2g21520.2 | 1539 | 8e-169 |
| Q94C34 AT4g39170/T22F8_70 | 1493 | 2e-163 |
| B9H0T8 Predicted protein | 1486 | 1e-162 |
| B9RH84 Phosphatidylinositol transporter, putative | 1482 | 3e-162 |
| Q94FN1 Phosphatidylinositol transfer-like protein III | 1468 | 1e-160 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G21520.1 transporter | 1564 | 6e-174 |
| AT2G21520.2 transporter | 1539 | 5e-171 |
| AT4G39170.1 SEC14 cytosolic factor, putative / phosphoglyceride transfer protein, putative | 1502 | 9e-167 |
| AT1G75370.1 SEC14 cytosolic factor, putative / phosphatidylinositol transfer-like protein, putative | 1212 | 4e-133 |
| AT1G75370.2 SEC14 cytosolic factor, putative / phosphatidylinositol transfer-like protein, putative | 1212 | 4e-133 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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