 |
Information for unigene UN24064
| FASTA Sequence |
| Unigene ID: UN24064 | Length: 846 |
SSR | | GGGAATCTGAATCTCTCTCTCTCTCTGTCGCAATCGTGGAGGATCGAGTAGCGAGTGAACATCATGTTTATGATAGATTGGTTCTA
CGGTGTTCTCGCTTCGCTAGGGTTATGGCAGAAAGAAGCTAAGATCTTGTTCCTCGGACTCGACAACGCCGGCAAAACCACCTTGC
TTCACATGCTCAAGGACGAGAGATTGGTGCAGCACCAGCCGACGCAGTATCCAACCTCTGAAGAACTTAGCATTGGTAAAATCAAG
TTCAAGGCTTTTGATTTGGGTGGTCATCAGATTGCTCGCAGGGTCTGGAAGGACTACTACGCTAAGGTGGATGCCGTGGTGTACCT
AGTGGATGCATACGACAAGGAGAGGTTCGCAGAATCGAAAAAGGAACTGGACGCACTTCTTTCAGACGAATCTTTAGCCACCGTCC
CCTTCCTCATCCTAGGAAACAAGATAGACATACCGTTCGCTGCATCAGAGGACGAGCTCCGTTACCATCTCGGCCTCTCCAACTTT
ACCACGGGAAAGGGTAAAGTGAACCTAGTTGATTCCAACGTAAGACCACTGGAGGTTTTCATGTGCAGCATCGTCAGGAAGATGGG
TTATGGCGAAGGCTTCAAGTGGCTCTCTCAGTACATCAAGTAACCAAGACTCCAAACCACATGGCTATCATTATTGTTAAACCGTA
AGTTCCTATAAATCTCGTTTTGTATTTTCTCTTGCGTTTCTTTTCTTTTTTTTTTGCATGTGTTGTAAGAAATGTCGTGAAACGTA
GCAACTCGTGTGTCTCTCTACCTTTTGTTTCTTGTAGTGACTTTTAAATTTTAATTCATATTATTTTAAACC
|
|
|
| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_192117 GTP-binding protein SAR1A [Arabidopsis thaliana] | 985 | 1e-104 |
| XP_002889409 Os01g0254000 [Arabidopsis lyrata subsp. lyrata] | 984 | 1e-104 |
| XP_002874941 Os01g0254000 [Arabidopsis lyrata subsp. lyrata] | 983 | 2e-104 |
| O04266 RecName: Full=GTP-binding protein SAR1A | 980 | 4e-104 |
| XP_002275765 PREDICTED: hypothetical protein [Vitis vinifera] | 976 | 1e-103 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O04834 GTP-binding protein SAR1A | 985 | 5e-106 |
| O04266 GTP-binding protein SAR1A | 980 | 2e-105 |
| Q01474 GTP-binding protein SAR1B | 955 | 2e-102 |
| O04267 GTP-binding protein SAR1B | 930 | 1e-099 |
| P52884 GTP-binding protein SAR2 | 913 | 1e-097 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| B9RNF8 GTP-binding protein sar1, putative | 975 | 1e-103 |
| B2ZGG5 GTPase SAR1 | 971 | 3e-103 |
| B2ZGG7 GTPase SAR1 | 971 | 3e-103 |
| B9RZN0 GTP-binding protein sar1, putative | 970 | 4e-103 |
| B7FMA7 Putative uncharacterized protein | 965 | 2e-102 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G02080.1 ATSAR2 (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 2); GTP binding | 986 | 4e-107 |
| AT1G56330.1 ATSAR1B (SECRETION-ASSOCIATED RAS 1 B); GTP binding | 956 | 1e-103 |
| AT3G62560.1 GTP-binding protein, putative | 954 | 2e-103 |
| AT1G09180.1 ATSARA1A (ARABIDOPSIS THALIANA SECRETION-ASSOCIATED RAS SUPER FAMILY 1); GTP binding | 897 | 7e-097 |
| AT1G02620.1 GTP-binding protein (SAR1A) | 533 | 1e-054 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
|
|
|
|
