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Information for unigene UN24072

FASTA Sequence
Unigene ID: UN24072Length: 1141 SSR 
GGACATCAACTCAGATCTCTCTTTGTATCTACTCCTCCACCAGATTTGACCTCAAGTTCGGTCTCCTAGCTAGAAAAAAAAAGCTT
ATCTTACAGTGTCACTAACTCCGATAATCTAGACACCATTAAAGCCCCAAGAATCAGATTCTCTCTCACGAGAATTCAAAAACTTG
GATCCGAGAGCAAGTGAGGTAGCTTAGCTTAAGCTGCAATGGCTGGATTCACTATGAGCTTGAATCTACTTCTACTAGTAGCTATG
GTAGCTACCAACATCCTCTCTCTCTACCACCTCTCCTCCACCACCAACTTCTTCCAATCCACCCTCAAATCCTCACCCTCCTCCGT
CCCCACTGTCCCCGACCACCTCCTCCGCCAGCTCCACACCATCCGCGCCGCCATCAACCACCTCACAAACCACCCGGACAAATCAT
CAACCTCAGCCGCCTCCACCGTCTCCTCCTCCTCCTCCTCAGCTCCGCCGAAAGATCTCCTCCTCTACTCCAAGCTCTCCCCGATA
GCCTCCGCTTGCCACAACCACCCCGACCTCCTCCACCAGTACATGAACTACGCTCCTTACTCCTTCTGCCCCTTCGACGGGGTGGT
GGATTTGGTGAGGTGCGGGAGGGCGGTGAACCGGTGGATCCCGGTTACGGTTATGGAGTTTTTCTTGTTCGATTTGGACCGGGTTT
TGAGAGGCGGGGGTTATCTCTGGTTGGATCGGTTCTTTAGCAAGAAGGTTGATCTTGAGAATGTGTATGGGCCGATGATCGGGAAG
CTGGGGTACAAGAAGGTGAAATGGGCTGTGGCGAACAAGGTGGATTCGAAGCATGGTGAAGTTTTCTTGACGGCTCTGCTTCAGAA
ACCTGTTGCAAGATGATGAACAAGGGCAATTTCCTCGAACGTGTATGTTTGTACTTTGTAGCAAACAGCTTACTGTTGTTGAAGAT
TTGGGAAAGAAGATTCTTGGAACGAACAATTACAGATAATGAAGCTTTTTCCAGCTGTAAGCACTTCTGCAAAACAGTAGTGATTT
TAATATGTTTTTTTTTAATCTATTGTGTAACAGGTACTGATTAGTTATACATAACTTATGGCTTCTTTCTGTCATAGCTTATATCA
TTATATGCATTCATATTATTCGC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_174272 putative methyltransferase domain-containing protein [Arabidopsis thaliana]5461e-053
XP_002890831 hypothetical protein ARALYDRAFT_473184 [Arabidopsis lyrata subsp. lyrata]5211e-050
XP_002519740 conserved hypothetical protein [Ricinus communis]4233e-039
CAN63784 hypothetical protein VITISV_009253 [Vitis vinifera]4053e-037
XP_002273992 PREDICTED: hypothetical protein [Vitis vinifera]4053e-037

Swiss-Prot top hits (Blast detail)Scoree value
Q02817 Mucin-21846e-013
Q9LVN1 Formin-like protein 131765e-012
Q9FPQ6 Vegetative cell wall protein gp11684e-011
Q91YD9 Neural Wiskott-Aldrich syndrome protein1613e-010
Q84ZL0 Formin-like protein 51595e-010

TrEMBL top hits (Blast detail)Scoree value
Q8RWB7 At1g297905461e-053
B9S171 Putative uncharacterized protein4232e-039
A5BSC2 Putative uncharacterized protein4052e-037
B9I111 Predicted protein4052e-037
B9N9B7 Predicted protein3892e-035

Arabidopsis top hits (Blast detail)Scoree value
AT1G29790.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: methyltransferase (TAIR:AT5G40830.2); Has 127 Blast hits to 127 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 127; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).5466e-056
AT1G29790.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: Golgi apparatus, plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; BEST Arabidopsis thaliana protein match is: methyltransferase (TAIR:AT5G40830.2); Has 127 Blast hits to 127 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 127; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).5466e-056
AT3G05390.1 unknown protein2061e-016
AT4G01240.1 unknown protein1981e-015
AT5G40830.1 methyltransferase1845e-014

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
102  100%

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