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Information for unigene UN24090

FASTA Sequence
Unigene ID: UN24090Length: 1465 SSR 
GGCAGTTGGTGGGTCGGGTTGTTGGCAACGGTTCGAGTGAAAGTGCTTGTCTTTATACACAACAAGGCAACAAAGGAACTAACCAA
GACACCATGGTTGTCTGGGAGAATTTCTGTTCAAGAAGGGATACAGTGTTATGCGGTGTATTCGATGGACATGGTCCGTTTGGTCA
TATGGTTGCAAAGAGAGTCCGAGACATGTTACCTTTTACTTTATCAACCCAACTGAAAAAGATTTCAGGGAGGGTCCTCGAGCCTA
CTACTTGCAAAGAAGAAGAAGAAGAGCAATGGTGTGAGTTACAGCCAAGTGAGAAAGACGAGAAGCTACCACTTCCCGAAATGTAT
CTCCCGCTGAAACGAGCGTTGCTCAAGACTTGCCAACAGATGGATAAAGAGTTAAAAATGCATCCAACTATCAACTGTTTCTGCAG
CGGAACAACTTCTGTTACCGTCATCAAACAGGGTAAGGATCTGGTGGTGGGGAATATTGGTGACTCGAGAGCTGTTCTTGCGACAA
GAGACGAAGACAATGCTCTCATGGCTGTACAGTTAACCATAGACTTAAAACCTGATTTGCCAAGTGAATCTGCAAGAATCCAGAAA
TGTAAAGGTAGAGTGTTTGCCTTACAAGATGAGCCTGAGGTTGCACGTGTGTGGTTACCAAACAGCGATTCACCTGGTCTGGCAAT
GGCTCGAGCTTTTGGTGACTTCTGTCTTAAAGATTACGGTCTAATCTCTGTTCCGGATATCAACTACCGCCGTCTCACTGAAAGAG
ATCAGTTCATTATTCTAGCCACAGATGGGGTCTGGGATGTTTTGTCGAACAAAGAGGCTGTTGATATTGTGGCTTCAGCTCCAAGT
CGAAGCACTGCAGCTCGTGCTTTAGTATGCACTGCTGTTCGAGCGTGGAGGCTCAAGTATCCTACTTCCAAGAACGATGACTGCGC
TGTAGTATGTCTCTTTCTCGAAGATTCCTCGGCGGAAGCATCCATGGAAGCTTCGGAAACCGTTGTTCATTCACGCAAAGAGTCTA
TAGAGAGTGTCACCATCACATCAAGCAAAGATGGAGAGAAGAAAGAAGAGGCTTTACCAGAGACCGATGAGATTGTACCTGTTTTA
GAGATCAAGGAAGAAAAAACGTCTGAGAGGATTGAGTCCAAGAAGACAACACTTGCCGAATGTATATCTGTCAAGGATGATGAAGA
GTGGTCGGCGTTGGAAGGCTTGACAAGAGTCAACAGTCTCTTGAGCATTCCTAGGTTCTTGTCTGGTGAGCTAAGATCAGGTAGCT
GGAGAAAATGGTTGTGAGTATGCATGCAACACTCAGAGAAGTGATCAAACAAACAAACAAACAATCACTGATTTTCATTTCATGAT
TGGTTTTTTCTTTTCCAATGATGACATTAAAATCAGTGTTAGCAAATGTCACAGACGAGTTTATTGTGGAAGATGTCTTTTAGATA
TAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
NP_173072 putative protein phosphatase 2C 6 [Arabidopsis thaliana]18983e-210
XP_002890154 phosphatase 2C family protein [Arabidopsis lyrata subsp. lyrata]18903e-209
XP_002305698 predicted protein [Populus trichocarpa]13142e-142
XP_002444805 hypothetical protein SORBIDRAFT_07g028300 [Sorghum bicolor]11806e-127
NP_001152031 LOC100285668 [Zea mays]11771e-126

Swiss-Prot top hits (Blast detail)Scoree value
Q9SA22 Probable protein phosphatase 2C 619195e-214
Q6ZKL8 Probable protein phosphatase 2C 6611552e-125
Q8RXZ4 Probable protein phosphatase 2C 1811427e-124
Q9LR65 Probable protein phosphatase 2C 110943e-118
Q6K6N7 Probable protein phosphatase 2C 1410469e-113

TrEMBL top hits (Blast detail)Scoree value
B9ST96 Protein phosphatase-2c, putative14011e-152
B9H2A5 Predicted protein (Fragment)13141e-142
C5YJ78 Putative uncharacterized protein Sb07g02830011804e-127
B6U7X6 Catalytic/ protein phosphatase type 2C11771e-126
B8LLH8 Putative uncharacterized protein11473e-123

Arabidopsis top hits (Blast detail)Scoree value
AT1G16220.1 protein phosphatase 2C family protein / PP2C family protein19204e-215
AT1G79630.2 protein phosphatase 2C family protein / PP2C family protein11426e-125
AT1G79630.1 protein phosphatase 2C family protein / PP2C family protein11426e-125
AT1G79630.3 protein phosphatase 2C family protein / PP2C family protein11426e-125
AT1G03590.1 catalytic/ protein serine/threonine phosphatase10942e-119

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
111  20%
 
82  40%
 
102  40%

Unigene MembersMember information