RadishBase

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Information for unigene UN24098

FASTA Sequence

Unigene ID: UN24098	Length: 1216	SSR
TTTTTTTCTGCTTGACAAAAAGAGGTTTTACTATGTTGGAGCTGGACTCTTCACTGGCGTCACAGTAGCTCTCCACCCTTTCTCCG TCGTCAAAACACGCCTCCAAGTCGCTTCCAAAGACATCGCCGAGAGAAGCGCCTTCTCTGTCGTTAAAGGCATACTCAAAAACGAC GGCGTTCCTGGTCTCTACCGAGGTTTCGGCACTGTGATCACAGGCGCAGTACCTGCGAGGATCATATTCCTCACTGCTCTGGAGAC CACGAAGATCTCTGCTTTTAAGTTGGTTGCGCCTTTTGATCTGAGCGAGCCTACGCAAGCTGCTATTGCTAACGGCCTTGCGGGGA TGACGGCTTCTCTGTTCTCTCAGGCCGTGTTTGTCCCTATTGATGTTGTTAGCCAGAAGTTGATGGTGCAGGGGTACTCAGGTCAT GCTGAGTACGCTGGTGGTATTGATGTCGCCACGAAGATCATCAAGTCGTATGGTGTGAGGGGATTATACAGGGGGTTTGGTCTGTC TGTTATGACGTATTCTCCTTCGAGTGCTGCTTGGTGGGCTAGCTATGGATCAAGTCAGCGTGTTATCTGGAGGCTATTAGGCTATG GTAGTGACTCGAAGGCTACTGTTGCTCCTAGTCAGTCAAAAATTGTACTCGTCCAGGCTTTGGGAGGTATTATCGCAGGTGCAACA GCTTCCTCGATCACGACACCGTTGGATACAATCAAAACACGGCTGCAGGTGATGGGACACCAAGAAAATAGACCATCAGCGAAAAA AGTGGTCAAGGATCTGATAGCACAAGATGGGTGGAAAGGGTTCTATAGGGGTTTGGGTCCAAGATTCTTCAGCATGTCTGCTTGGG GTACCTCGATGATATTGACTTACGAATACCTAAAGCGTCTGTGCGCAATAGAAGATTAGAAAAGGCCTCACCCCACTACTACTACT ACTATTCGTTGGTTTTTCTCCTTTGGACTAACTCGAATAGACATGATTCAAATCTCGGTTTATTGGGAGCTTTCCGTTTTTATACA GTCGGACCGTTCTTTCAGATTTGAAGTCTGAGTTCCGTCATTTTAATATCATTCTTTTGCGTATTTTGGAGTGTATTCTTACAAGC AGAAGAAACTCTAGATAATGATCTTCTGCTTTATTAGCTTCTGAGGGTTAAAGAGGCACTGTGAGTTGTTTTTGAAAATCCCATTT TGCAATCAGTTC

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
XP_002871676 mitochondrial substrate carrier family protein [Arabidopsis lyrata subsp. lyrata]	1434	2e-156
AAM63042 putative mitochondrial carrier protein [Arabidopsis thaliana]	1425	2e-155
NP_568317 Mitochondrial substrate carrier family protein [Arabidopsis thaliana]	1425	2e-155
ABD96928 hypothetical protein [Cleome spinosa]	1323	1e-143
XP_002530999 Mitochondrial carnitine/acylcarnitine carrier protein, putative [Ricinus communis]	1202	1e-129

Swiss-Prot top hits (Blast detail)	Score	e value
Q5RD67 Solute carrier family 25 member 44	400	6e-038
Q96H78 Solute carrier family 25 member 44	399	8e-038
Q8BGF9 Solute carrier family 25 member 44	332	5e-030
Q75AH6 Mitochondrial aspartate-glutamate transporter AGC1	207	1e-015
Q7S2H8 Mitochondrial thiamine pyrophosphate carrier 1	197	2e-014

TrEMBL top hits (Blast detail)	Score	e value
Q8LDS8 Putative mitochondrial carrier protein	1425	1e-155
Q949U9 Putative mitochondrial carrier protein	1425	1e-155
Q1KUQ8 Putative uncharacterized protein	1323	9e-144
B9SYD0 Mitochondrial carnitine/acylcarnitine carrier protein, putative	1202	9e-130
C6TNC1 Putative uncharacterized protein	1177	7e-127

Arabidopsis top hits (Blast detail)	Score	e value
AT5G15640.1 mitochondrial substrate carrier family protein	1426	6e-158
AT1G72820.1 mitochondrial substrate carrier family protein	674	9e-071
AT5G26200.1 mitochondrial substrate carrier family protein	630	1e-065
AT4G01100.1 ADNT1 (ADENINE NUCLEOTIDE TRANSPORTER 1); ADP transmembrane transporter/ AMP transmembrane transporter/ ATP transmembrane transporter/ binding	167	5e-012
AT2G30160.1 mitochondrial substrate carrier family protein	154	2e-010

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


11	1			50%


7	1			50%

Unigene Members	Member information