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Information for unigene UN24117
| FASTA Sequence |
| Unigene ID: UN24117 | Length: 859 |
SSR | | AGGGCAACTTCTTTGACTTCTTTACCAAGTCATCACTTCCCGTACGGACAAAACACCAACTCCAACAACAACACTTCAAGCATGAT
GCTTGGTTTGTCCCACACGGGGGCCCCACAGAATCTTGATCATCGCTCTGGCGACGCTCTCCGACTTGGAGAAGGAGTAGGTGGAG
GAGCCGCCCCACGCTCTTCATCTGATCTGATTGCTGCGAATGCTTCAGGTTACTTCGTGCAAGACCAAAACCCTAGCCTTCATGAT
CAACAACAAGGATTTTTGGCTGCAAGCAATAACATCAAGCCATCACCAATGAATTTTCAACAGAGTCTGATGCAGTTCTCGCATGA
TAGCCATAACTTTCCTTCCTCCAATCTCTTCAATCTCAGTTTCCTCTCTGGAAACAGCGGAGTTACTTCTGCTACAAGAAACTCTA
ATGCTGCTGCTATTTCTTCGGGTAATCATATGATCTCGAACCATTTTGATGGCGAAAATGCTATTGGAGGCGGAGGAGGAGGAGGG
GGAAGGAAGCACGGGCCTCTTCCCTAACAATCTGATTAGCTCGGCGGACAGAACCAGCTCAGGAGCAGTGCCTTCCCTCTTTGGCT
CATCAATTCAAAATCCCAATTCAACACCTCATATGTCAGCCACTGCTCTTCTTCAAAAAGCTGCTCAAATGGTTTCAACCTCAAGC
AGCAACAACAACAACAATAATAGTAACAATGCCTCATCCATTCTAAGAAGCTTTGGGAGTGGAATGTACCGAGAAAACGAGAGTAA
TCTTTATGATTTGATGAACTCTTTCTCTAACCCCGGTCCAACGGGAAACAACGCTAGTGGAGTACATTCTCCGTTTGGTTCGTAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002875111 hypothetical protein ARALYDRAFT_904431 [Arabidopsis lyrata subsp. lyrata] | 716 | 2e-073 |
| NP_178316 indeterminate(ID)-domain 5 protein [Arabidopsis thaliana] | 682 | 2e-069 |
| AAL91203 putative C2H2-type zinc finger protein [Arabidopsis thaliana] | 682 | 2e-069 |
| ACQ90602 putative C2H2 zinc finger protein [Eutrema halophilum] | 464 | 3e-044 |
| XP_002521878 nucleic acid binding protein, putative [Ricinus communis] | 205 | 3e-014 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8RXE0 Putative C2H2-type zinc finger protein | 682 | 1e-069 |
| Q9ZUL3 ID1-like zinc finger protein 2 | 682 | 1e-069 |
| C7SI20 Putative C2H2 zinc finger protein | 464 | 2e-044 |
| B9S7A9 Nucleic acid binding protein, putative | 205 | 2e-014 |
| B9S7A8 Zinc finger protein, putative | 167 | 6e-010 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT2G02070.1 AtIDD5 (Arabidopsis thaliana Indeterminate(ID)-Domain 5); nucleic acid binding / transcription factor/ zinc ion binding | 682 | 6e-072 |
| AT2G02080.1 AtIDD4 (Arabidopsis thaliana Indeterminate(ID)-Domain 4); transcription factor | 122 | 6e-007 |
| AT2G02080.2 AtIDD4 (Arabidopsis thaliana Indeterminate(ID)-Domain 4); transcription factor | 122 | 6e-007 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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