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Information for unigene UN24131

FASTA Sequence
Unigene ID: UN24131Length: 869 SSR 
GGAGACCAATTAAGATCAAAAACTTTCTTCCAACTCCACCTTGATCTCTCCGCAGCTATCTTTCTTCCTCGTTGGCTCCGTTAAAC
CCTAGTACGGTACTATCGTGTAGAAATTGGAATCTCTCATCCTGCACGCTAAACACCTGCCCACTCTTCTTATCCTTTTGTTTTCT
TCAGACATTAAAGCTTGGAGCTTGACGAACTACTGATTCTTTTAAGGTGAGAAATTGACTGATTTTGTTTGGAGAAGTTGATCACG
CCCTGAAGGTGTTTGATAAAATGGCTCAGTCAGTTGGTCCAAGACTCTACAGTTGCTGTAACTGCAGGAACCATGTGGGACTTCAC
GATGATATCATCTCTAAGGCTTTTCAGGGAAGAACCGGGAGAGCCTTCCTCTTCTCCCGCGCAATGAACATTGTGGTAGGGCCTAA
AGAAGACCGGCACCTTCTAACGGGTCTCCACACCGTGGCTGACATATCTTGTGCTGACTGCAATGAACCCTTGGGCTGGAAGTACG
GGCGAGCCTACGAGAGCTCACAAAAGTACAAGGAGGGCAAGTTCATATTCGAAAAAGCTAAGATTGTCAAGGAAGAGGATTGGTAG
TGAAAGCCAACATGTTGAATTCATTATTGGATTGACTCAAAACTGTACATATATAAAAAAAAAACTTGGCTTTGTCGATTCCAATC
TTTATGGACATCACAAGTCGTCATCATCATCATCATCATCATCCATTTTCCGGTTCATTGTCTCTCTCTGCATGTTGTTAAATAAT
GTCAGTGTCCTGTGTTTAAGTGAATATGTTCGTATATTTTATGTATATACAGTATGTTCTTCGTTCAAGCCTTCTCTATCAATAAA
GTTAAAGCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002869544 hypothetical protein ARALYDRAFT_328916 [Arabidopsis lyrata subsp. lyrata]6014e-060
CAB38286 putative protein [Arabidopsis thaliana]5924e-059
NP_001031733 yippee-like protein [Arabidopsis thaliana]5324e-052
XP_002321386 predicted protein [Populus trichocarpa]5002e-048
XP_002318443 predicted protein [Populus trichocarpa]4903e-047

Swiss-Prot top hits (Blast detail)Scoree value
Q9T096 Protein yippee-like At4g277455322e-053
Q65Z59 Protein yippee-like 13332e-030
Q9DG42 Protein yippee-like 13332e-030
O60688 Protein yippee-like 13332e-030
Q9ESC7 Protein yippee-like 13332e-030

TrEMBL top hits (Blast detail)Scoree value
B9IDM3 Predicted protein5001e-048
B9I1Z5 Predicted protein4902e-047
B9RPI2 Fad NAD binding oxidoreductases, putative4866e-047
B9GK91 Predicted protein4841e-046
C6SZF2 Putative uncharacterized protein4704e-045

Arabidopsis top hits (Blast detail)Scoree value
AT4G27745.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Yippee-like protein (InterPro:IPR004910); BEST Arabidopsis thaliana protein match is: yippee family protein (TAIR:AT5G53940.1); Has 697 Blast hits to 697 proteins in 149 species: Archae - 0; Bacteria - 0; Metazoa - 401; Fungi - 132; Plants - 110; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink).5357e-055
AT5G53940.1 yippee family protein2992e-027
AT3G11230.1 yippee family protein2849e-026
AT3G11230.2 yippee family protein2849e-026
AT4G27740.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Yippee-like protein (InterPro:IPR004910); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G27745.1); Has 684 Blast hits to 682 proteins in 148 species: Archae - 0; Bacteria - 0; Metazoa - 389; Fungi - 132; Plants - 111; Viruses - 0; Other Eukaryotes - 52 (source: NCBI BLink).2822e-025

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
122  100%

Unigene MembersMember information