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Information for unigene UN24159
| FASTA Sequence |
| Unigene ID: UN24159 | Length: 923 |
| SNP | ATCAAAAGCTGGATCCATCATTATTCGTAACATTACACAGTCCAATATATGACTCAATGCTAAGTCATCATTAAAGAAAAAACACT
CAAGATTTTGTTTAAGAGTACAGAGTTCTCTCTCTTTCTCTCTCTTTTTTGGTGATGATTATTGAGGAGTTAATGCTTTTTGAGAG
CATTCATCTTGTCCCTGAGGTAGTAGAGTTTCGCTCTTCTAACCCTCTTCTTGTCCAAAACCTTAATCTCCCTCAGGTTTGGAGAA
TACAAAGGGAACATGGATTCGACTCCCACTCCAGCCACAAGCCTTCTAATCCTGAACGTAGAGTTAAGACCAGCATTACGCCTTGC
TATGACAATTCCTTTAACGATTGAAACACGTCTCTTGTTCTCAGGCACTTCCACTTTCAGCTGCACAATGTAACCGGGCCTTATCT
CCGGAATCTCCCTACGAGTTCTCACTTCCTCAACTGCCTCCTTGTCTACAATCTGCATGATATGCTTGGCGGTTTTGTCAAGCCGC
TTGAACTTGATTCTTGGAGGCGCATCAGGAGAAAATCCTTGAGGAACAGAGTCTCCAACGGTGGAAAAGCATCTCGATGAATACGT
AAAGTTTTGTTTAGGTAGTGCGGAAGAGAAAGAAGCGGCCTTTGTCAACGAGCTAATGAGATACGACGCTGCTGGCGAATCGAAGG
CTCTGGTGGAACGGAATGAATCAAACCCTCCTCCTGGCCTCCTCGACTCATTATCATCAGACCAGCTTGGAGAAGAAGACGAAGAA
GTGAAACGAGGGAGAGTGTTGGAGATGGAGAAGCGGTTCCTCTGAAGCAACCTTGTAGTGCTTCGAATCGATTGCATTTTTCTCCC
GCAAAGAGAGGATTCGATCTAATAATGCCCTGAAGGTTTTACAGCGGAGTTTGAGAAACCTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_192900 ribosomal protein L19 [Arabidopsis thaliana] | 842 | 5e-088 |
| NP_196736 Ribosomal protein L19 family protein [Arabidopsis thaliana] | 841 | 6e-088 |
| XP_002871497 ribosomal protein L19 family protein [Arabidopsis lyrata subsp. lyrata] | 841 | 6e-088 |
| NP_564213 Ribosomal protein L19 family protein [Arabidopsis thaliana] | 778 | 1e-080 |
| XP_002519953 50S ribosomal protein L19, putative [Ricinus communis] | 597 | 1e-059 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q8W463 50S ribosomal protein L19-1, chloroplastic | 351 | 2e-032 |
| Q8RXX5 50S ribosomal protein L19-2, chloroplastic | 347 | 6e-032 |
| P82413 50S ribosomal protein L19, chloroplastic | 347 | 6e-032 |
| Q2VZV5 50S ribosomal protein L19 | 247 | 2e-020 |
| Q2RV56 50S ribosomal protein L19 | 244 | 5e-020 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9T0D0 At4g11630 | 842 | 3e-088 |
| Q9LYF5 AT5g11750/T22P22_140 | 841 | 4e-088 |
| O48691 At1g24240/F3I6_17 | 778 | 9e-081 |
| B9S1T8 50S ribosomal protein L19, putative | 597 | 9e-060 |
| B9RAT4 50S ribosomal protein L19, putative | 575 | 3e-057 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G11630.1 ribosomal protein L19 family protein | 866 | 3e-093 |
| AT5G11750.1 ribosomal protein L19 family protein | 852 | 1e-091 |
| AT1G24240.1 ribosomal protein L19 family protein | 807 | 2e-086 |
| AT4G17560.1 ribosomal protein L19 family protein | 351 | 2e-033 |
| AT5G47190.1 ribosomal protein L19 family protein | 347 | 5e-033 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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