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Information for unigene UN24183

FASTA Sequence
Unigene ID: UN24183Length: 1478 SSR 
GGAAAGCTCTCTCATTCATTATCCTTCTCCATCAAACAGAGAGAGAGAGAGAGAGCGTAATCATGAACGCCGTGGCATCGAGTTTC
GCTCAATCTCCCTCCTTTCTTCGTCCAACTCCCAAAACCGCCTCTGGTTCGATTCTCCTGACGTCAACCTCCCCTGGCTTCATCCG
ATTCGGTTCCGGACCTCAATTTCGCCACAGAAACAGCTCTTGTCTTAAACTCTCGAGACCATCGCAAAGCCGAACAACTTCTCTCA
AGTCTCGGACAAGCTTTGTCCTCAAAGCTTCAGCTTCAGCTTCCGGTTCCGGTGATGCGTCCTCCGACTCAATCGCGCCGCTTCAG
TTGAAGTCTCCCGTGGGGCAGTTTCTGTCGCAGATACTCGTCAGCCATCCTCATCTCGTTCCAGCAGCTGTTGAACAACAGCTCGA
ACAGCTTCAAATCGACCGAGAAGCCGAGCAACTGATCAGCAAAGACTCTTCCTCCTCCTCTCTTCCTCCTGCAACAGACATTGTTC
TTTACAGGAGAATAGCTGAGGTTAAGGAGAAAGAGAGAAGAAGAACTTTGGAAGAGATTTTATATGCTTTAGTTGTTCAGAAGTTC
ATGGACGCTAATGTTTCTCTTGTACCCTCCATTACCTCCTCCTCTGGGAGAGTTGACACTTGGCCCACTCAAGAAGACGGGGACCT
CGAGCAGCTTCACTCCCCCGAGGTCTACGAGATGATTCAGAATCATCTCTCCATCATTCTTAAAAACCGTGAGGGTGATCTCTCCA
CCGTGGCGCAGATAAGCAAGCTCGGTGTTGGACAGGTCTATGCTGCTTCCGTCATGTATGGTTATTTCCTGAAGCGGATTGACCAG
AGGTTTCAGCTCGAGAAGACGATGAAGATCCTTCCTGGTGGGTCAGATGAAGGAGGTGAGACTACTAGCATTGAGCAAGCGGGGAG
GGAATCAGAGAGAAGCTTTTATGAAGAAGCAGAAGAAGAGACTTATCAAGCTGTATCCTCAATGGGAGGGATTAATGCCAGTGGTG
GTTCCAGCAGCGAGACAACGAAACAGTCCCGGCTAAAAGACGTACGTCATGTCCTTCGATGGAGAAACCCTTCAGAGATACGCTAC
GATTAGATCGAGAGAAGCGGTTGGGATCATTGAGAAGCACACGGAGGCCTTGTTTGGGAGGCCGTAGATTGTGATAACACCGCAAG
GGATTGATTCGTCCAGGGACGAGCATATAAAGATCAGTTTCAAGGGACTGAAGAGTCTTGTGTTGGAGGCTGTGACGTTTGGTTCG
TTCCTTTGGGATGTTGAGAGTCATGTGGATTCAAGGTATCACTTCGTACTGAACTGAAATTGTATGTGTGTGTGTTTTTGGTGATA
CTTGTAGTTTCTCTGGGAGGGCTTTGGTGGGTTTTCTTTGTATTTTGTTACTCTTTGAAAACTTAGATTCATCAATACCTAAATGT
TAAATTAAACCCATGG

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002894114 hypothetical protein ARALYDRAFT_473985 [Arabidopsis lyrata subsp. lyrata]11332e-121
NP_175278 uncharacterized protein [Arabidopsis thaliana]11242e-120
NP_001031154 uncharacterized protein [Arabidopsis thaliana]11091e-118
NP_001185170 uncharacterized protein [Arabidopsis thaliana]11019e-118
BAH56904 AT1G48450 [Arabidopsis thaliana]10767e-115

Swiss-Prot top hits Scoree value
No hits found  

TrEMBL top hits (Blast detail)Scoree value
Q9LP80 At1g48450/T1N15_511392e-122
Q2V4I1 Putative uncharacterized protein At1g48450.211241e-120
C0Z2H5 AT1G48450 protein10919e-117
Q9LVJ0 Gb|AAF02142.19044e-095
Q8W4L9 Putative uncharacterized protein At3g178009011e-094

Arabidopsis top hits (Blast detail)Scoree value
AT1G48450.1 unknown protein11472e-125
AT1G48450.2 unknown protein11329e-124
AT3G17800.1 mRNA level of the MEB5.2 gene (At3g17800) remains unchanged after cutting the inflorescence stem9042e-097
AT3G17800.2 mRNA level of the MEB5.2 gene (At3g17800) remains unchanged after cutting the inflorescence stem8872e-095
AT1G32160.1 unknown protein4795e-048

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
61  33%
 
82  67%

Unigene MembersMember information