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Information for unigene UN24188
| FASTA Sequence |
| Unigene ID: UN24188 | Length: 1675 |
SSR | | GGAATAAGAAAAAGAAAAAAAAAGAAAGAATAGGTTTGGTGAGAGAGAGAGAATGGTAAAGGTAATCGATTCCCATTACCTGACCA
TCACCGCCATTGTCACTGTGGTCTATCAATTGATATTCTTCGTGATCACAGCTCTTTTCAAATTCGATCAAGTTACCGACTTTGCC
GGAAGTACAAACTTCGTGATACTTGCTGTCTTGACTCTAGTTCTCAAAGGCACTTGGCATTTTCGTCAGGTTGTCTTGACTTCACT
GGTAGTAGTATGGGGACTTCGTCTTGGAATGTTCCTCCTTATGAGGATCCTGAAATGGGGTGAAGACCGACGCTTTGATGAAATGC
GCGAAAATATGGGGAAACTGGTAGTCTTCTGGATTTTTCAGGCGGTGTGGGTTTGGACAGTCAGTTTACCAGTTACTCTTGTGAAT
GCAAGCAACGGTGGAAGATTGTTTCAGCCCGCGGATGTTATTGGCTGGACAATGTTTGTTGCAGGTTTCTTGGTTGAAGCTATAGC
TGATCAACAAAAGCTTTTGTTTAAGAATCATCAAGAAAATAAAGGAAAATGGTGCGATGTTGGACTGTGGAAGTATTCACGCCACC
CTAACTACTTTGGAGAGATGTTACTGTGGTGGGGCATATATGTGGCTTCATTGCCTGTTCCTAGAGGTGCAGAGTACCTTGTCATA
GTTGGACCAATCTTTCTCACTTTGCTGCTTTTCTTCGTTAGCGGCATACCATTACTCGAGGAATCGGCGGACAAAAAGTACGGTAA
CTTGGGAGCTTATAGACACTATAAGAAGACAACCAGTCCCCTAATTCTGTTGCCTCGAGGAGTTTACGGGTACTTACCAAATTGGT
GCAAGACCGTCTTTCTCTTTGAGTTTCCTTTGTACAGCAAGAATCTCCCTCACGAAACTACAGTCTGACGAAACTCAAAAAAGAAA
CATTGACTGGGGAGATGAAGAGATGATTACAGTCTTTTGGCCAACACATGTCCTGTGTTCCCTTATGATCAAACTCTGCTTTTGTA
TAGATTCTCATTATCTTCAAATATTTGTGAAACGTGATTGATACATTGATTGAGAATACAATTAAGATTCAAATCAAAGCTTAAAA
AGATGTTGGAAGCAGGAAAATTGCATATAATTCAATAAAGTAATTTCTTTTATCGTTTCTAAGGAGAAAAAGCTACTGACGAAGGG
AACTATTACTGAAATTCTCTAAGGAAATCACTGCACCTGATCTCAGTTCACTCGAGGAAGAATCACTTGAATGAGAGAGTAAAATG
TATAGTACCCAGAGATGAAGGCAGACCAGATACACTAGAGCCCAGATTTTTGCAGTGGGGTTTTTACGCAAGAACACAGCTCCAGA
GACGAATATAGCGTTTAGCTGCATCACTAACCATCCCAAGTGTTTCTTGCCTGACCTGATTTTATCTTGTAAAGCTGGTTTGAACT
TTGACCCTGAGAGTTGCCATTCCCCTGCTTCAAGATCTTGGGACGAGGCTTCTGTTGCAGACATGCCTTTGTTCTCTTCTATTAGC
CTTGATACGGCCTCGATTCTAAACGATAGAGTTGCTTTCTCCGAGGAAAGCGCTTCGACCTGGGATTGTTTTTGAATAAGATGGTC
AGTTAGCTGGTCAAGTCTTCGTTTCAGTTCAATTTCCACTT
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002890265 hypothetical protein ARALYDRAFT_889231 [Arabidopsis lyrata subsp. lyrata] | 1422 | 7e-155 |
| NP_173256 uncharacterized protein [Arabidopsis thaliana] | 1411 | 1e-153 |
| NP_974140 uncharacterized protein [Arabidopsis thaliana] | 1259 | 5e-136 |
| NP_565068 uncharacterized protein [Arabidopsis thaliana] | 1255 | 2e-135 |
| AAL06914 At1g73650/F25P22_7 [Arabidopsis thaliana] | 1251 | 4e-135 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| B0F9L7 Golgin candidate 2 | 732 | 3e-076 |
| Q8TBA6 Golgin subfamily A member 5 | 169 | 5e-011 |
| Q7SXE4 Golgin subfamily A member 5 | 167 | 9e-011 |
| Q6GNT7 Golgin subfamily A member 5 | 160 | 6e-010 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q3E6X4 Putative uncharacterized protein At1g73650.3 | 1259 | 4e-136 |
| Q3ECD5 AT1G73650 protein | 1255 | 1e-135 |
| Q940M8 At1g73650/F25P22_7 | 1251 | 3e-135 |
| Q8LEY8 Putative uncharacterized protein | 1248 | 7e-135 |
| Q9LM31 T10O22.15 | 1197 | 6e-129 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G18180.1 oxidoreductase, acting on the CH-CH group of donors | 1411 | 4e-156 |
| AT1G73650.3 oxidoreductase, acting on the CH-CH group of donors | 1259 | 2e-138 |
| AT1G73650.2 oxidoreductase, acting on the CH-CH group of donors | 1256 | 4e-138 |
| AT1G73650.1 oxidoreductase, acting on the CH-CH group of donors | 896 | 2e-096 |
| AT1G73650.4 oxidoreductase, acting on the CH-CH group of donors | 896 | 2e-096 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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