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Information for unigene UN24214
| FASTA Sequence |
| Unigene ID: UN24214 | Length: 980 |
SSR | | GGATTCATTGCTTGCTGTGAAGAAAACATAGTGAGAGAGAGAGACAAAAATGGCGACGGTACCTCTGTTCACCCAGTTTCCATGCA
AAACTCTAGCTCCAAGCTCCTCCAACTCTAAACTCCAACCAAAATCTCCGACTCTAGTGCCCGTAAATCCAATCAACCGGTGGTCG
GAGGTTAGAACCACTGTCCATCGGCCGGATTTCAAGGTCCGAGTTAGCGACGTTAACGACGTTAACGTATCTGTGGCGGAGAGAGT
AGCAGAAGAAGCCATCGAATCAGTGGAAGAGACGGAGCGGCTGAAGAGATCGCTAGCGGATTCTTTGTACGGGACAGATCGAGGTC
TTAGCGCATCGAGCGAGGTGAGAGCCGAGATCAGTGAGCTGATCACGCAGCTCGAGTCCAACAACCCTAATCCAGCTCCGAACGAT
GCTCTGTTTCTCCTCAGCGGCAAATGGATTCTCGCTTACACGTCGTTCGTTGGTCTGTTCCCGTTGCTCTCACGTAGAATCTCACC
GTTGGTCAAAGTGGATGAGATCCCCGAGTTCGTGGAGGTTCTTGGTCAGAAAATCGATCTCAACCCCATTAGAGGATTACTCACGT
CTGTCCAGGACACGGCTTCTTCAGTGGCGAGAACCATTTCAAGCCAACCACCGTTGAAATTCTCTTTGCCGCAGACAGAGCGCAGT
CGTGGCTGCTCACGACTTATCTCGACAAAGACCTTCGGATCTCGAGAGGCGATGGTGGAAGCATTTTTGTGCTTATCAAAGAAGGC
AGCTCTCTCTTAAACCCTTAAAAAACATTGTAAAGTAAAATCTATATAGAACCATGTCTGTATTTAATAGTTAAGTGTTATTGTTG
GAGAGTTATGATATGATGGTTGTTGTGTATTCAGGGTTTAAATGTTTGATAATTTTGGCTTATAAAGTTGTAAAAGGTCTCTGATA
CAGTATGTTATTACTTGCACAAACCGATTTTGTC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002867781 hypothetical protein ARALYDRAFT_914391 [Arabidopsis lyrata subsp. lyrata] | 510 | 2e-049 |
| Q94KU6 RecName: Full=Plastid lipid-associated protein 2, chloroplastic; Flags: Precursor | 500 | 2e-048 |
| AAK57562 plastid-lipid associated protein PAP2 [Brassica rapa subsp. campestris] | 495 | 9e-048 |
| NP_193955 putative plastid-lipid-associated protein 2 [Arabidopsis thaliana] | 479 | 7e-046 |
| AAL67120 AT4g22240/T10I14_70 [Arabidopsis thaliana] | 478 | 9e-046 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| O81439 Probable plastid-lipid-associated protein 1, chloroplastic | 630 | 9e-065 |
| Q94KU6 Plastid lipid-associated protein 2, chloroplastic | 500 | 1e-049 |
| O49629 Probable plastid-lipid-associated protein 2, chloroplastic | 479 | 3e-047 |
| Q94FZ9 Plastid lipid-associated protein 1, chloroplastic | 463 | 2e-045 |
| O99019 Light-induced protein, chloroplastic | 336 | 1e-030 |
| TrEMBL top hits (Blast detail) | Score | e value |
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| Q9ZSZ9 Fibrillin (Fragment) | 417 | 7e-039 |
| B9N8G9 Predicted protein | 337 | 1e-029 |
| A9PJU9 Putative uncharacterized protein | 333 | 4e-029 |
| B9SEJ1 Plastid-lipid-associated protein, chloroplast, putative | 332 | 5e-029 |
| Q0H8Z9 Fibrillin | 322 | 7e-028 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT4G04020.1 FIB (FIBRILLIN); structural molecule | 630 | 8e-066 |
| AT4G22240.1 plastid-lipid associated protein PAP, putative | 479 | 3e-048 |
| AT2G35490.1 plastid-lipid associated protein PAP, putative | 229 | 3e-019 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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