Library    |     Search    |     Batch query    |     SNP    |     SSR  

Information for unigene UN24238

FASTA Sequence
Unigene ID: UN24238Length: 1434 SSR 
GGATTCCGAATAGTACGCAGAGAAAAGAAAAGAATCACTTCCGGTGGTAATAATCTAAACTCAACCTCAATAATGTCGGCGTCTTT
CTCCGTCGCATGAACTCATTGATGTCTAAGGGAAGCCTTCTTTGAATAATTGTCTTAGTGCTACGAATCACAGATCACTATGGACA
AAGAGAGTGTAAATGGTATTGGATCACCTCAAAGATCCAACAGCGTTGACAGCTTAAAGGTTGAATCTCCTGGTAGTTCGACGAGA
AAAGGTTTCGGTTTGAAGAAGTGGAGAAGGATCAAGAGAGATACTCCTCCAGTGAAAGACGAGGCTGCTGCTGCTGCTGCGCCTGT
TGATGATGGTAGTAAATTGCTGAAGCGTAATTTGACTGGTTTGGTGAACCCTCCATCCAAACATGTAGACACGTCTTCGGTTGAAG
CAAGACAGGGTGGCGAAGAAGGCTCTGTTGGATCTGTGAATATGGCTGTGCATCATCATCATCATCATCTTCTTCCAGGTGTAGTC
AACGGGTTTAGTCCGGCTCAAGGTTTTATGTTTAACGTAGGCCAAGGTTTTGAGAAGAGTGAAGAGCATAGCGGGGGAGGAGGGAA
GATTGTTTCAGGTAGCCAAGGGAGGGATCCCATCAAGAATGGAAGCGAAGAGCAGCCCGTAGATTCGGATAGTGATTTTGTGTTTT
CTAGTGGCTCGGTTTCTGCTGTGAACCATATAGCAGAAGGTCAAGCTAGGGAACAAGTCCAAACATATAGCAGAAGCGAGAACGGA
GGAGATGAGAGTCATAAGAAGAAGAACGACCATGATTGGGCAGACAAGGATCACATTGCAGATTCCATCAGATGTCTTGCAGCTCT
GCAGGAAGCTCTTTGGAAAGAGGTTCAAAGTTTCCAGGAGCTGAGTAAGGAATCTATACCACAACATTCGAACATCGATGAAGTCG
ATTCAGGATCACAGGTACCTATCTTGAAGCAGAAGGTAAAACATCTCCAACACAGACTCGAGGAAGCTAGAGCTGATCTGGATGCC
AAGGAAGCCAGGATCCAAGAACTCGAAAACTCGATGATCGAATCCGAACTTGAAAGCGTTTTCCAGAGAAAGATGGAAGCTGAAAT
CCAGTATTTGATGCTCACAAGTGCTCTGAGTGCATCATCATCAACACAAGTACTCAAAGAACAACCGAAGAAGGTACAACATTCTG
TGACTCGAGATCCTGAACCGAACCGTGGGAACATGTTAGGGAAAACATGCAAGTCCAGTTTGTATTTCTTGACGCAGCTGATCTTG
CTAGTCTCTATACTTCGGTTACTGCTCCACCAGTCCTCTCCTGCTTCACGATTAGTTATACCAACCTGAAAAAAACGGTTCATGTT
GGTGTTCATGTACTTTTTACCAAACATTTTTGTTTTCAAATTTATTGCTGTGATGACT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002884963 predicted protein [Arabidopsis lyrata subsp. lyrata]5103e-049
BAB02805 unnamed protein product [Arabidopsis thaliana]5077e-049
NP_566455 WPP domain-interacting protein 3 [Arabidopsis thaliana]5077e-049
NP_001154269 WPP domain interacting protein 1 [Arabidopsis thaliana]1644e-009
CAA18225 putative protein [Arabidopsis thaliana]1644e-009

Swiss-Prot top hits (Blast detail)Scoree value
Q94AV5 WPP domain-interacting protein 35073e-050
Q8GXA4 WPP domain-interacting protein 11642e-010

TrEMBL top hits (Blast detail)Scoree value
B9GHK4 Predicted protein1572e-008

Arabidopsis top hits (Blast detail)Scoree value
AT3G13360.1 WIP3 (WPP-domain Interacting Protein 3)5072e-051
AT4G26455.1 WIP1 (WPP-DOMAIN INTERACTING PROTEIN 1); protein heterodimerization/ protein homodimerization1641e-011

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
82  100%

Unigene MembersMember information