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Information for unigene UN24246

FASTA Sequence
Unigene ID: UN24246Length: 1485 SSR 
GGAGGAGCTACGGCGGTTTGATTGCTTCTCTCAAAAAGGCAAAGACATCGCACCGTCAACTTCTCAGATCTCTCTCTCTGTCTCCC
TCTTCGTCTCTCTACCAATGGATTATATGACGATGATAAAAGATGATGAACCACAGGAAGAAGAAGAAGAAGAAATCTCCGATAAG
TTTCTCTGCTGCGTCTGTCTGGAACTTCTTTACAAACCAATTGTGCTATCGTGTGGTCATATATCGTGTTTCTGGTGCGTACACAA
GTCCATGAGTGGCTTCCGTGTGTCTCATTGTCCCATCTGTAGAGACCCTTATCTTCACTTTCCCACTATCTGCCAAAGGCTTCATT
TTCTGCTAAAGAAGTTATACCCCATTGCGCATAACAAGAGAGAAGCACAACTTCTAAGTGAGTTCACTTTCTCTATGTTATTGGGT
TCAGGTGTTGCTGCTTATAGTGTGTGTTTTAAATGTCAAATGTTTCCAGAGGATGAACAAGCACGAGCTTGTTTCTCACCTCAGAT
TGATGAACCGAAGGCTAAGCTTGAGTTTACAAGTGTCTCTGATGAGTGCTCTAATCCAGAAGAACCCCTTGAAGATGCAAAAACTG
TTAACGTTCACGAGAATGACTTACCTAAGAATGGCGTTTCAAAAGATGATTTGCTCTGTTCAGCATGTAGGGACCTGCTCGTGCGA
CCTGTGGTTCTCAACTGCGGACATGTGTATTGTGAAGGTTGTGTGGTAGATATGATGGATCAAGAAAGCGAAAAGATCATATGTAA
AGAGTGCCATGTTTGTGACCCAAGAAGATATCCCAAAGTTTGTTTGGCTCTTGAGCAGCTTTTGGAGGAAAGCTTTCCTGAAGAAT
ACAGTTCAAGGAGAAGTTTGATTCAGAAAAAGCTTACCCACAATAGCAGGAAAGGGCGGCACATCCTCCTCATCAGAAGAAAACAG
CAACAACAGTCTTCCAAACACTACCTGTAATGTTCACATCGGAGTTGGTTGTGATTCATGCGGAGTTTATCCAATCATAGGCGAGC
GATACAGATGCAAAGACTGCAAGGAGAAAATGGGGTATGACCTTTGCAAAGCCTGTTACGAGTCTCCTTCTAAAGTTCCGGGGAGA
TTCAACCAGCAACACACTCCTGACCACAGGTTTAAGCGTGCATCGTTTCGTCAGCTTCCGCTCAATCTCAATTTTGTCGGTATCCT
TCTGGCACCGATGGTCCGTGAGTGTGTGAATGCACAAGGACGTGATGAAAGCCAGGAAGGGCCTCATGATTCTAATGAGTCATCAT
CACCAAGCACAGAATGAAATAGCAGTCTTGAGTGTGCTGGAAACTTGTAGGGAGAGACATGGTGTGTGCTTGTTGAAAATGGTTTG
CGTTAGTATATATTTTATGGAAAGAAAAAAGTTGTGGTTTCTAAAACATTTTAAATCAATTGTTAAATTATGACCATAAAAATAAA
ACTAATCAGAATATTAGGTTTAC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002883562 hypothetical protein ARALYDRAFT_479998 [Arabidopsis lyrata subsp. lyrata]8365e-087
AAM64697 PRT1 [Arabidopsis thaliana]8276e-086
NP_189124 E3 ubiquitin-protein ligase PRT1 [Arabidopsis thaliana]8267e-086
ABK94910 unknown [Populus trichocarpa]3697e-033
XP_002301781 predicted protein [Populus trichocarpa]3697e-033

Swiss-Prot top hits (Blast detail)Scoree value
Q8LBL5 E3 ubiquitin-protein ligase PRT18263e-087
Q5PQN2 Bifunctional apoptosis regulator1391e-007
Q8R079 Bifunctional apoptosis regulator1354e-007
Q9NZS9 Bifunctional apoptosis regulator1337e-007

TrEMBL top hits (Blast detail)Scoree value
A9PEV7 Putative uncharacterized protein3695e-033
B9GQH3 Predicted protein (Fragment)3695e-033
B9S532 Putative uncharacterized protein3435e-030
B9H0A3 Predicted protein3311e-028
B8AFI4 Putative uncharacterized protein3042e-025

Arabidopsis top hits (Blast detail)Scoree value
AT3G24800.1 PRT1 (PROTEOLYSIS 1); ubiquitin-protein ligase8263e-088
AT1G74990.1 zinc finger (C3HC4-type RING finger) family protein1282e-007

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
81  25%
 
211  25%
 
92  50%

Unigene MembersMember information