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Information for unigene UN24265
| FASTA Sequence |
| Unigene ID: UN24265 | Length: 873 |
SSR | | GGATTAGAAGGAAACATCTGATCGGATCTAGCTCTCTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCCCCGACAGATCGAA
GAAGTAACGTTAGATGGACAAAGGCAAATCCGTGATGGGTGCTGGTCGGAGATGGGCCGTCGATTTCTCGGACCAATCCACTGTTC
CATCTTCCCGCGACATCCTCGATCCCCCTGGCTTCTCTCGTGCTTCTCCCGAACAGGATGACTCAGCAACGAGCCGCCAAAAGAAA
GACGCTGAAGCTAACTGGAAACTTCAGAAAGCATGGGAGGTAGCGCAATCACCATTTAAGAATCTGATGATGATGGGTTTCATGAT
GTGGATGGCTGGCAACACTGTTCATCTCTTTAGCATTGGTATTACTTTCTCTGCTCTTTGGCAGCCTCTCAGCGCCCTCCAGAGCG
TTGGAAAGATTTTTGAGCCATTCAAGGATAATAAGGTGGAACTACTTATGCCGAAACTAGTGTTTCTTGCCCTTAACCTTGGAGGC
TTAGCTTTGGGTATCTGGAAGCTCAATACTTTGGGGCTTCTTCCAACACATGCATCGGATTGGGTTTCTTCTCTACCACCTCCTCA
GGAAGTTGAACACTCTGGCGGAGGATTTGCTTTCCACTGATGAGATAACTACAAAGATGCTCGAGTGATTTGTTCAATCCTCCTGA
CATGAGGGGAGGGAAGATTCATGTGGAACTTGTCATATTGTAGCATTTTCAAAACTCAGAAACCATAGCTTTTTTCACTTTCTAGT
ATGATGGTCATTGCTTATCATAACTATGGATTGTATTATTTGGCACTTGAGCTACCTGCTTCCCAGCTTCTTTAGACACGAGTAGA
TAAAGTTCCAGAC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_568238 uncharacterized protein [Arabidopsis thaliana] | 915 | 2e-096 |
| CAB96833 putative protein [Arabidopsis thaliana] | 851 | 4e-089 |
| NP_001078568 uncharacterized protein [Arabidopsis thaliana] | 851 | 4e-089 |
| XP_002871440 hypothetical protein ARALYDRAFT_325616 [Arabidopsis lyrata subsp. lyrata] | 851 | 4e-089 |
| XP_002309687 predicted protein [Populus trichocarpa] | 821 | 1e-085 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| Q6GR43 Transmembrane protein 85 | 264 | 2e-022 |
| Q6P011 Transmembrane protein 85 | 261 | 5e-022 |
| Q3T0K8 Transmembrane protein 85 | 258 | 1e-021 |
| Q5J8M3 Transmembrane protein 85 | 256 | 2e-021 |
| Q9CZX9 Transmembrane protein 85 | 256 | 2e-021 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q93VE6 AT5g10780/T30N20_50 | 915 | 1e-096 |
| A8MQD8 Uncharacterized protein At5g10780.2 | 851 | 3e-089 |
| Q9LEW1 Putative uncharacterized protein T30N20_50 | 851 | 3e-089 |
| B9HB78 Predicted protein | 821 | 8e-086 |
| A9PHF1 Predicted protein | 815 | 4e-085 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G10780.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP017207, transmembrane protein 85 (InterPro:IPR016687), Protein of unknown function DUF1077 (InterPro:IPR009445); Has 281 Blast hits to 281 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 114; Fungi - 83; Plants - 23; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). | 916 | 5e-099 |
| AT5G10780.2 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Uncharacterised conserved protein UCP017207, transmembrane protein 85 (InterPro:IPR016687), Protein of unknown function DUF1077 (InterPro:IPR009445); Has 281 Blast hits to 281 proteins in 136 species: Archae - 0; Bacteria - 0; Metazoa - 114; Fungi - 83; Plants - 23; Viruses - 0; Other Eukaryotes - 61 (source: NCBI BLink). | 851 | 2e-091 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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