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Information for unigene UN24271

FASTA Sequence
Unigene ID: UN24271Length: 1122 SSR 
GGATTCGAAGTTACACAAGCCATAGCTCCTGCAATTTCTTCCCTTCTCTCTCTTCTTTGACTTTTTTTTCCCAGTTTGAGTTTTTC
TTTACAGATCATCAGATTTGGTTTCATATTCAGACGCTGAGATTTCAGATTCCGGAAAGATCTGGCTACACAAAAATGGACTACCC
TGAAAGTTATCGGATAACGTTTACTGGAATCTTGGTTGCTTTTCTTGAATTAGCATTTGCTTATTGTCTATTATGTGTATCAGCTT
TGGTCTTTATTGCATCCAAGTTCCTACTCTTTGTGCCTTGTCCCTCTTCTGGAATGCTTGGGTGCCACCAAAACGTCCATAAACTT
CTCTTTGACTTGCCATTCGAGATCATACTCAGAATCCAGAAGATGGCCGTTGCCAGTAGAACAAGCGTTTGGCATCATCAAGACCA
AGAAGAAGAGAGAAAGAGTTGGGTTGGTAAAGATAAGAACTTGGAATTAATGAATAAGGTGAGATTGCTTGAAGAAGCTGTTGAGG
AAGAGAGGTTGGCTCGATCTGCTCTAATCGTGGAATTGGAGGAAGAAAGAGCGGCTTCAGCGTCAGCAGCTGATGAAGCCATGGCT
ATGATTCTGAGGTTACAAGCTGATAAAGCTTCACTTGAAATGGAAGGAAAGCAGTATGAGAGAATGATTGAGGAGAAATTTGCATA
TGATGAGGAAGAGATGAATATTCTCAAGGAGATTTTATTCAAAAGGGAGAGGGAAAAGCATTTTCTTGAGAAGGAACTTGAGACTT
ACAAGCACATTGATGATGATGATGATGATGATCAAGAAGCGATTGTGTATGATGTTCATGTCATTGAAAATGATAATAATGCTAAG
AAGAAAGATGTTGACGCAGCAGCACATAAAGTAAGGGACTGTGATGATCAGGTGAAGCAAATGGATGACTTATTGAAGGATAGTGA
TTCATCAACATAACCTTCTTAATACTGTTGGTTGTAATATCTTTGCTCTCTTGCTTACTCTGTTTTCCGTAATGTGGTTTGGGTAG
ACTTTGTATAAATTTGTGAAAATATTAATGTAGAACTTTGTGACATCTGTAAACGCATCAAATGATATTAAGATCGCTTCTATTTG
TATT

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002863266 hypothetical protein ARALYDRAFT_497080 [Arabidopsis lyrata subsp. lyrata]9905e-105
NP_193052 uncharacterized protein [Arabidopsis thaliana]8202e-085
CBI17315 unnamed protein product [Vitis vinifera]3722e-033
XP_002266466 PREDICTED: hypothetical protein [Vitis vinifera]3686e-033
XP_002518099 hypothetical protein RCOM_1019660 [Ricinus communis]3623e-032

Swiss-Prot top hits (Blast detail)Scoree value
Q75JC9 Uncharacterized protein DDB_G02716701291e-006

TrEMBL top hits (Blast detail)Scoree value
Q9SVR1 At4g131608202e-085
B9RWI0 Putative uncharacterized protein3622e-032
B9IJH5 Predicted protein3613e-032
B9S519 Putative uncharacterized protein3595e-032
B9RWI2 Putative uncharacterized protein3462e-030

Arabidopsis top hits (Blast detail)Scoree value
AT4G13160.1 unknown protein8933e-096
AT1G04890.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Intermediate filament protein, conserved site (InterPro:IPR018039), Protein of unknown function DUF593 (InterPro:IPR007656); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G13630.1); Has 6609 Blast hits to 4661 proteins in 382 species: Archae - 48; Bacteria - 283; Metazoa - 4004; Fungi - 343; Plants - 346; Viruses - 6; Other Eukaryotes - 1579 (source: NCBI BLink).3396e-032
AT4G13630.1 unknown protein3333e-031
AT5G16720.1 unknown protein2421e-020
AT1G70750.1 unknown protein2302e-019

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

Unigene MembersMember information