RadishBase

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Information for unigene UN24276

FASTA Sequence

Unigene ID: UN24276	Length: 735	SSR
GGGCGCTCCACTAGTAAAGTTGGAAGCCACTTGCCTCGTGTTACTCCGCTTCTGCGTTTTCCCTAGAAAGTTTGGCAAGAAAGTTT CCATCTCTCAAATTCATTGAATTTTTCGATTTCTCGAGGTTTTCTATCGAAAATTTGGAATGAGTGTGAAAGTAGCATACACTTCG CCATTCCTTCAATGGGCGGCTCATCCTTCTTCCTCTTCTCAAACCCTATCTTCCAGAGCCATCTCAACTCCTTCAAAACGACGACA CAACTCACCGTTTCATCAACCATCCTCTCATTTCCTGCCGCAGAGACTGAACGGTTCGTCTCTCTTCGGGACAAAGCTCCGTCGCT CTAAGTCCTGCGAGCTCTGGCAATCATCTAAACCGACCAAGACTCACTTAGTCTTCAGCGCAAACCTAAACCCCTTCTCCGACGAA GAGTTCTCCAAAAAGATCCAAGAGCTTACCCTCAGATTCCACCACGAGAGAGAATCAATGGACTCGATCGAGATGAAAGCCAACAG CGTCTTCGACCTCCCTCTCTCGCTTCGGATCATAAAGAAGAAGAAGAAGCGGAAGACGGGAGGAGGAAGAAGGAGGAGTCAAACTA TCCGGCGAAGAATCATCATCGGCGATGAGCAAGGCCTTCTCGTCGATGGTGTTCATGATCAGAGAGATCCAGAGCTTCACGCTTCA CATGAGAGAGGTCTCTTCTACGAAGACTTGCGAGGGATCTTGCTTAG

Annotation (GO term)

GenBank top hits (Blast detail)	Score	e value
BAC43604 unknown protein [Arabidopsis thaliana]	362	1e-032
NP_565685 tetratricopeptide repeat-containing protein [Arabidopsis thaliana]	362	1e-032
BAH57022 AT2G29670 [Arabidopsis thaliana]	362	1e-032
XP_002881065 binding protein [Arabidopsis lyrata subsp. lyrata]	265	3e-021
AAF82193 Strong similarity to an unknown protein At2g29670 gi\|3582340 from Arabidopsis thaliana BAC T27A16 gb\|AC005496. EST gb\|R90693 comes from this gene. This gene may be cut off	196	3e-013

Swiss-Prot top hits	Score	e value
No hits found

TrEMBL top hits (Blast detail)	Score	e value
C0Z2U3 AT2G29670 protein	362	1e-032
O82388 At2g29670/T27A16.23	362	1e-032
Q8GW79 Putative uncharacterized protein At2g29670	362	1e-032
Q8VZC8 At1g07280/F22G5_32	196	2e-013
Q9LML9 F10K1.1 protein (Fragment)	196	2e-013

Arabidopsis top hits (Blast detail)	Score	e value
AT2G29670.1 binding	362	7e-035
AT1G07280.1 binding	279	3e-025
AT1G07280.2 binding	279	3e-025
AT1G07280.3 binding	279	3e-025

EST library breakdown for ESTs in the assembly

Library

ESTs

Percentage of ESTs in assembly


11	2			50%


9	1			25%


6	1			25%

Unigene Members	Member information