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Information for unigene UN24281

FASTA Sequence
Unigene ID: UN24281Length: 828 SSR 
GGGATCAAACAAAATCCTTGGCTCCCCTCCCTCCCCCCGAATCTCGCTCTCTCTCTCTCTCTTGCTTGCCAATGGCGAATAATAAT
CAAGCAAGTCTTCTTCTCCAGAAGCAGCTCAAAGATCTGTGCAAGAACCCGGTCGATGGTTTCTCAGCTGGTCTCCTTGACGAGAG
TAACGTTTTTCAATGGAGCGTCTCCATCATGGGTCCTCCTGATACCTTGTATGAAGGGGGATTCTTTAATGCAATTATGACGTTTC
CAGATAATTATCCTAATCAGCCACCAACTGTGCAGTTCACTTCCGAGATGTGGCATCCTAATGTTTATTCTGATGGTAAAGTTTGC
ATATCGATTCTTCATCCTCCTGGTGACGATCCTAATGGATACGAGCTTGCCTCTGAACGTTGGACCTGTCCAAACGGTAGAAAGCA
TTGTGTTGAGTATCATATCCATGCTCTCGGGTCCCAACGATGAGTCACCGGCTAACGTGGACGCTGCAAAAGAGTGGAGAGACAAC
AGAGCAGAGTTTAGGAAGAAAGTGAGTCGCTGTGTTAGAAAATCGCAGGAGATGCTATGAGCGTCTCTCTCCTGCGTTTTTATGTG
TTCTAGAAATTTTTCTCCTAAGCTAAGAGAGAGAGCGAGCGAGCGTAAGAAGCATCCTCAATCATCAAGAAGCAGCCAGATGAATC
TGTGTGCTCAAAAGCTTGTTTTTTTTTTTCTTTTGGTTTTGGAGTTGGCTTTAAGGTTTGGAATATTGTGGTGGAATCAAATCCAA
TCCACCTTTTAGGATTATAATCGTACTCTCGTTAATGGATTCGTTTTCACATCC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002876298 ubiquitin-conjugating enzyme 14 [Arabidopsis lyrata subsp. lyrata]5701e-056
NP_567020 ubiquitin-conjugating enzyme E2 14 [Arabidopsis thaliana]5647e-056
NP_001190096 ubiquitin-conjugating enzyme E2 14 [Arabidopsis thaliana]5647e-056
AAL86003 putative E2, ubiquitin-conjugating enzyme UBC7 [Arabidopsis thaliana]5602e-055
NP_568902 ubiquitin carrier protein 7 [Arabidopsis thaliana]5602e-055

Swiss-Prot top hits (Blast detail)Scoree value
P42747 Ubiquitin-conjugating enzyme E2 145643e-057
Q42540 Ubiquitin-conjugating enzyme E2 75501e-055
Q42541 Ubiquitin-conjugating enzyme E2 135303e-053
P25868 Ubiquitin-conjugating enzyme E2 74183e-040
P34477 Probable ubiquitin-conjugating enzyme E2 73914e-037

TrEMBL top hits (Blast detail)Scoree value
B9DGG2 Ubiquitin carrier protein5645e-056
B9SR14 Ubiquitin carrier protein5601e-055
Q06H22 Ubiquitin carrier protein5483e-054
B9HMG1 Ubiquitin carrier protein (Fragment)5475e-054
C6T1V1 Ubiquitin carrier protein5475e-054

Arabidopsis top hits (Blast detail)Scoree value
AT3G55380.1 UBC14 (ubiquitin-conjugating enzyme 14); ubiquitin-protein ligase5643e-058
AT3G46460.1 UBC13 (ubiquitin-conjugating enzyme 13); ubiquitin-protein ligase5303e-054
AT5G59300.1 UBC7 (UBIQUITIN CARRIER PROTEIN 7); protein binding / ubiquitin-protein ligase4164e-041
AT1G14400.1 UBC1 (UBIQUITIN CARRIER PROTEIN 1); ubiquitin-protein ligase2122e-017
AT1G14400.2 UBC1 (UBIQUITIN CARRIER PROTEIN 1); ubiquitin-protein ligase2122e-017

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
92  100%

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