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Information for unigene UN24352
| FASTA Sequence |
| Unigene ID: UN24352 | Length: 905 |
SSR | | TGAGCCTCCGCCTCTTATTACAACAACACTTCCAACTCCAACTCATCATCCTTCCTCGTTCTCTCCGCAATCAATCTCACATTTGG
TAATATCGAAATGGCGACGGCTTTCTCTGCCACCCTTCCTCTCCACGGATCTCAAGAGAATCGTCTCTTGCTTCCTCCCACCCGAT
TGGCTCCTCCTCCTCCTCCTCCTCCTTCTTCTTTCCTCGGATCCACCCGTTCTCTCCCCATTCGCAGACTCAATCACGCTCACGCC
GCTCCTCGATCTCCCGTCGTCGCAGTCCAGGAAGTTATCAAGGACAAGAAGAAACCCACCAATTCCCTCTTGATAACAAAAGAGGA
AGGATTAGTCTTGTACGAAGACATGATCCTCGGCCGTTCTTTCGAGGACATGTGTGCTCAAATGTACTACCGTGGCAAGATGTTTG
GTTTCGTCCACTTGTACAACGGCCAAGAAGCCGTCTCCACCGGCTTCATCAAGCTCCTCACTCAGTCCCGATTCCGTCGTCAGCAC
TTACCGCGACCACGTCCACGCCCTCAGCAAAGGCGTCTCCGCTCGTGCCGTCATGAGCGAGCTCTTCGGGAAAGTCACCGGTTGCT
GCAGAGGCCAAGGTGGGTCCATGCACATGTTCTCTAAAGAACACAACATGCTCGGTGGGTTCGCCTTCATCGGCGAAGTCATCCCT
GTCGCCACTGGTGCTGCGTTCACTTCCAAGTACAAGAGGGAAGTCTTGAAACAGGGTTGCGAAGACGTCACCGTTGCGTTCTTCGG
AGACGGGACTTGTAACAACGGGCAGTTTTATGAGTGTCTCAACATGGCTGCGCTTTATAAGTTGCCTATTATCTTTGTTGTTGAGA
ATAACTTGTGGGCCATTGGGATGTCTCACTTGAGGTCGACTTCTG
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| XP_002889385 PDH-E1 alpha [Arabidopsis lyrata subsp. lyrata] | 689 | 3e-070 |
| AAF26472 T25K16.8 [Arabidopsis thaliana] | 682 | 2e-069 |
| NP_171617 pyruvate dehydrogenase E1 component subunit alpha [Arabidopsis thaliana] | 682 | 2e-069 |
| XP_002267676 PREDICTED: similar to putative pyruvate dehydrogenase E1 alpha subunit [Vitis vinifera] | 652 | 5e-066 |
| XP_002515074 pyruvate dehydrogenase, putative [Ricinus communis] | 651 | 7e-066 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| P51267 Pyruvate dehydrogenase E1 component subunit alpha | 512 | 4e-051 |
| Q1XDM0 Pyruvate dehydrogenase E1 component subunit alpha | 506 | 2e-050 |
| Q9R9N5 Pyruvate dehydrogenase E1 component subunit alpha | 347 | 5e-032 |
| O66112 Pyruvate dehydrogenase E1 component subunit alpha | 340 | 3e-031 |
| Q1RJX4 Pyruvate dehydrogenase E1 component subunit alpha | 329 | 7e-030 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| O24457 At1g01090/T25K16_8 | 682 | 1e-069 |
| Q9MAM6 T25K16.8 | 682 | 1e-069 |
| B9RNK3 Pyruvate dehydrogenase, putative | 651 | 5e-066 |
| B5LAW2 Putative pyruvate dehydrogenase E1 alpha subunit | 646 | 2e-065 |
| C6TL67 Putative uncharacterized protein | 639 | 1e-064 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT1G01090.1 PDH-E1 ALPHA (PYRUVATE DEHYDROGENASE E1 ALPHA); pyruvate dehydrogenase (acetyl-transferring) | 682 | 7e-072 |
| AT1G59900.1 AT-E1 ALPHA; oxidoreductase, acting on the aldehyde or oxo group of donors, disulfide as acceptor / pyruvate dehydrogenase (acetyl-transferring) | 302 | 8e-028 |
| AT1G24180.1 IAR4; oxidoreductase, acting on the aldehyde or oxo group of donors, disulfide as acceptor / pyruvate dehydrogenase (acetyl-transferring) | 288 | 3e-026 |
| AT5G09300.1 2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 alpha subunit, putative | 167 | 4e-012 |
| AT5G09300.2 2-oxoisovalerate dehydrogenase, putative / 3-methyl-2-oxobutanoate dehydrogenase, putative / branched-chain alpha-keto acid dehydrogenase E1 alpha subunit, putative | 167 | 4e-012 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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