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Information for unigene UN24361
| FASTA Sequence |
| Unigene ID: UN24361 | Length: 1228 |
| SNP | ACAACTAATCGTTATTTTATTTTTAATGAACCAGAAAATCGTTTCCTTATAAAGATCCAAACAACAACCAAGTATTATTTTAGGTT
TATTGAGAACATAAAACATGGTAAGAAGTTCTCTCTCAGACAGCAACTGAGGAACTGGTCTCATTAAGAAGACCATGGAACGTGTA
ATACTCTGAAGTTTCTTTGAATCCAGGAATCAGTTCCGACAAGACCCTTAGTATTGCAGCCAAATGTTGCATATCATTCGACGCGA
ATGCTGCTTCCAGAAACAGTGACGATCGCACACTCGTCACCTTACGCTTCTGAGCATAACGCAGAGCTTCAAGATAGTATCCATCT
TGCACAAGGGAAGAGATATACTCATGGTGCAACGAGAGCTGTCTCAGCATATCAAGCCCAAGTTTCCTTACCCGCAGGTTTTGACG
ACCACTCTCGAGAAGCTGGAGCGCGACTTCCTTTGATGGTTCGATTATCTTGTTTGTGATGAATAGTGACAGTTCTGCAAATCGTT
TACTGTGTGCTAAAAGTCTGATGGTCATCACATAAATGTTGAGATCCACTTTGAGTTTCTCTGCGCTTATACTGCGAAGGAACTCA
GTTATGATAGCAACTAGGTAGTCAGATTCCTCAACCATCGTTTCCTCCACAGAAGCAAACACAAACTTGTAGAGCTCATCAGGTGA
AATGGCTGGTGACGAGAGTTGAGATTCCTGCTGCTCATCAGCAGGACCAGATGGTACATTTATTTCAACTTCTTCTTCTTCATCAA
TACTGCTTCCAGATGCTCTACCTCTTTCGTTACCAGGAGATGATGCTCCATCAGTTGGAGTAGTCTTTTCGTTCTTTAGTTCCTTG
TATATACCAGCTTTAACCGAGTATGAGTATGCTGTGACCAGTACATCTATCGCCTGTGTAACCTGAGTTGCTGGTCTGCGTTCCAG
AATAAGAGCCCTTGCTATCCCCAAGCATAGTTGTTTGGCCTTATTAGCTTCCAACTTCCTTCGCTGTAGAAACTCTAGAAGAGACG
TCCTGTCTGAGCTGCTAGTGGAAATTGCCTCAAGATCCAAATGCACCCTCCAGAGAACCTTGTTAGTCTGATCCAGGATAAGGTCT
GGAACCAGGAAGGTCCATGCATCTTCATACATGACTATGTTTTCATTGCTTGTAGATGGTTCTGCGCTTTCGTTTTCCTTGTTAGC
AGCTTGGGACGATGAGTCGGAGCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| BAB03113 unnamed protein product [Arabidopsis thaliana] | 1559 | 6e-171 |
| NP_187808 uncharacterized protein [Arabidopsis thaliana] | 1559 | 6e-171 |
| XP_002882761 hypothetical protein ARALYDRAFT_897410 [Arabidopsis lyrata subsp. lyrata] | 1555 | 2e-170 |
| AAG51047 unknown protein; 60615-56595 [Arabidopsis thaliana] | 1487 | 1e-162 |
| XP_002534438 conserved hypothetical protein [Ricinus communis] | 690 | 3e-070 |
| Swiss-Prot top hits | Score | e value |
|---|
| No hits found | | |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q9LHM0 Genomic DNA, chromosome 3, P1 clone: MEC18 | 1559 | 4e-171 |
| Q9C7B8 Putative uncharacterized protein T21B14.16 | 1487 | 9e-163 |
| B9T869 Putative uncharacterized protein | 690 | 2e-070 |
| A9PF87 Putative uncharacterized protein | 684 | 1e-069 |
| B9HA01 Predicted protein | 684 | 1e-069 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT3G12010.1 FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: sperm cell, cultured cell; CONTAINS InterPro DOMAIN/s: Colon cancer-associated Mic1-like (InterPro:IPR009755); Has 126 Blast hits to 120 proteins in 58 species: Archae - 0; Bacteria - 0; Metazoa - 93; Fungi - 0; Plants - 16; Viruses - 0; Other Eukaryotes - 17 (source: NCBI BLink). | 1560 | 2e-173 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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