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Information for unigene UN24371
| FASTA Sequence |
| Unigene ID: UN24371 | Length: 1553 |
SSR | | GGAGTGAGTGAGTGAGAGAGCTATCGATTCGAAAAACAATGGCGGCCACTCCGCACGTTTCGCCAACTCTTTCCCGCTACAAATTC
TTCTCAGCTTCCGCAGTCGAAAACCCTAATTTCTATCCACATCAAATTATCAACAGTCGTCGACGGAAATCGACCAAATCGCATCT
TCAAGCGCAGCACAACAATAGTACCAATATTAGCTATGGTCCTCGGACGACGACGGAACTCGCCTCCTCGAAGAAACTACGGATTA
GGCAAATGGAGATCGAGCAAGGACAAATAGAAGAAGAAGAAGAAGAGCTAGAGGATATGAGTGACGACGAAGCGAGTCTGCTATCG
TTGAGCATGAAACCGGACAGAAACATGGCGTTGCTCGACGATTACGAGATGGAGGAGGAGCTTGGCCACGCTCCTCCCGGTACCAA
TCATCGTAGCGGATACGTGGCGGTGGTTGGGATGCCGAACGTGGGGAAAAGCACGCTTTCGAATCAAATGATTGGCCAGAAGATCT
CTATCGTTACCGATAAACCCCAAACCACGAGGCATCGGATTCTCGGTATCTGTTCCAGCCCTGATTATCAGATGATACTTTATGAT
ACGCCTGGTGTGATCGAGAAGAAGATGCACAGGTTAGATACTATGATGATGAAGAATGTCCGTGATGCTGCCATCAACGCTGATTG
CGTTGTCATTCTTGTTGATGCTTGTAAAACTCCTGCTAATATAGACGAAGTCTTGAAAGAGGGCTTGGGAGACCTTGAAAAGAGGC
CACCTATGCTGCTTGTTATGAATAAGAAAGATCTCATTAAACCTGGTGAGATTGCCAAGAAACTGGAGTGGTATGAAAAATTTACA
GATGTTGATGAAGTTATACCTGTTAGTGCAAAGTATGGACATGGAGTGGAGGATGTGAAAGAGTGGATCTTATCCAAACTTCCCTT
TGGCCCACCTTATTATCCCAAGGATATTGTGAGTGAGCACCCAGAGAGATTCTTTGTTGCTGAGATCGTTAGAGAGAAGATATTTA
TGCAGTACCGAAATGAAGTTCCTTATGCATGTCAGGTCAACGTGCTGAGCTACAAAACTAGACCAGCTGCAAAAGATTTTATTCAA
GTAGAAGTAGTCGTGGATAAAAATTCTCAGAAGATCATCCTTATTGGAAAAGAAGGGAAGGCTTTGAAAACGCTAGCAACGGCCGC
TCGACTTGACATTGAAGATTTCCTTCAGAAAAAAGTCTTCCTTGAGGTGGAAGTGAGAGTGAAGGAAAATTGGAGACAAGATGAGG
GACTTCTCAAGTACTATGGCTATGGAGGACAGATCCGGGCTATGTAAGTAAGTGTGTGTTGGCTTCAAATGGGTTATGAAGAAGGG
CAAATGGGTTATGAAGAAGGGTAGTAAGTGCAAATGGCACGGCTCAGGTCAGCTTTTTCCCCTTTTTTGTTTTGTTTTGTATGTAT
TTTAACCGATACGGCTCAGCCTCAGGATATATAGCTTTTTGTCTTTAATCTCAATTCGACGATTCCTTTCGAAAATAAAACTCTTC
CTTCC
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| GenBank top hits (Blast detail) | Score | e value |
|---|
| NP_201448 GTP-binding protein Era [Arabidopsis thaliana] | 1902 | 1e-210 |
| XP_002865066 GTP binding protein [Arabidopsis lyrata subsp. lyrata] | 1878 | 8e-208 |
| ADQ43214 GTP binding protein [Eutrema parvulum] | 1878 | 8e-208 |
| ABB45853 hypothetical protein [Eutrema halophilum] | 1871 | 5e-207 |
| XP_002521548 GTP-binding protein era, putative [Ricinus communis] | 1558 | 1e-170 |
| Swiss-Prot top hits (Blast detail) | Score | e value |
|---|
| C6E2H7 GTP-binding protein era homolog | 593 | 3e-060 |
| A5G693 GTP-binding protein era homolog | 591 | 6e-060 |
| Q8EPY0 GTP-binding protein era homolog | 580 | 1e-058 |
| B2V2K0 GTP-binding protein era homolog | 577 | 2e-058 |
| B2TMB9 GTP-binding protein era homolog | 577 | 2e-058 |
| TrEMBL top hits (Blast detail) | Score | e value |
|---|
| Q8VZ74 GTP-binding protein-like | 1902 | 9e-211 |
| Q0ZR46 Putative uncharacterized protein | 1871 | 3e-207 |
| B9S6C9 GTP-binding protein era, putative | 1558 | 7e-171 |
| Q9FJZ2 GTP-binding protein-like | 1523 | 8e-167 |
| B9HF36 Predicted protein | 1499 | 5e-164 |
| Arabidopsis top hits (Blast detail) | Score | e value |
|---|
| AT5G66470.1 GTP binding / RNA binding | 1920 | 4e-215 |
| AT1G30960.1 GTP-binding protein (ERG) | 299 | 4e-027 |
| AT3G12080.1 emb2738 (embryo defective 2738); GTP binding | 136 | 3e-008 |
| AT3G12080.2 emb2738 (embryo defective 2738); GTP binding | 136 | 3e-008 |
| AT1G72660.1 developmentally regulated GTP-binding protein, putative | 119 | 3e-006 |
| EST library breakdown for ESTs in the assembly |
| Library |
ESTs | Percentage of ESTs in assembly |
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