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Information for unigene UN24386

FASTA Sequence
Unigene ID: UN24386Length: 1664 SSR 
CCAAGTTTTAATTATCTCAATAAACACCTTATGTTCATGTACAATAATGATTTATAGAGATGCTACGTTGAATTCACTCCGTATAC
ACTCTAAAATACATGTTCTTCGTGGCGTATGTAACTATCAACAAGTCACCATGAAAGAGCTCCTGACCGCAACTCTGACCGCACCA
ACCACACTCAGTTGCCTTGTCTCCGGCCTCAGATCTTTACTTTCAGTATCTCTGCAACTTGCTTCCATCTGAACCCCTACAAAATA
TGCTGTCTTGCCTGAAGCATTACGAACTGGCGATATATGAAGAAGATTCCAGAACGTGCTCTTATCTTTTCTGTTACTGTAATTTA
ATATTTGCACTGTGCATGGTTTCCCCTTTAAAATGCATTCCTTCATCTCGTAGAGTACCGAGGAATCTGTATCAACCCCACTCAGA
AATCTACAATTCTGTCCCAACACTTCATGTCTCTTGTAACCAGTCAATGTCAAAAAGGCATCACTAGCATAAACGATAGGCATGTC
TGGTAAGCACGGATTGGTTAATACGAAACTATGTTTGATTCTACCGAGTGATATAACTAACGAGGAGCTTAAGCAGTAATCTGATC
CACGCAAACAGTTCCGCTTCCCACATACTAATCTGCCAGCAAACTCGCTGTACCGCGTCAGAGTAGCTAACACATTGCTAACTGCT
TCAGCAGATTTAAGCTTCTCGGATTCACTAGCTTCACAATGTTCCCAGTTCTCTAACTCTTGTTCATCGCATTCCACTGGTAAAGC
TCGTTCCTCCTGATGCACGTAACTACCCAAGCAAACCTCTCTCCGACAAGAACCAAACACCATTTCCGAACGACCCGACACATCTC
CCCTCATGTTCTGTCCCGAAATGGGGACCTGAACGGCGACGAAATGGACCACTCTCCCATCGTCACTCCCGAACACAGGGATCATA
TGGAACAGCATCCAAAACGGAGATCCGGATTTGCGGTAATTCAAGAGGCTCACCTGAACGGGCCTCTCCTCGCGAATCGCCTCGCG
GATCTCCATGATCGATCTCCGGTTGGTCTTGGGACCCTGGAACGCCCTCCCGTTTCTCCCGATGACCTCTTCCCGAGAGTACCCGG
TCATCTTGAGGAACCCGGGGCTGGCGAAAACGATCGGGTGGCCCGAGATAAACGGGTCGGTGATCGTGAAACTGTGCGGAAGCTCG
TCTAACGCTTCTCTGATCCATAACGAGTGACAACGAGCGTTGTTAAAGGCTCCTCCTTCTTTCTCCTCGGTGGTGGCGGCGGTGAA
GAGCGATGCTGGAGATTGGGTTATGGACATAGTCGTAGCGAACTGGTATCACTGTTCTTCTTCTTCTTCTTCGTCTTCTACTATTC
AGTGCCAATCCCATGTGGGTTCTAGAGCGAAAAGTTTAAACCTTTCTTCTTGGGTTTGATCGGAACACGAAAACCCCAGATTACAA
TTTCAATCGGGAGTCTAGAAAACCCATTGGAAAAGAAAAAAAAAATTGAAGCTTTACACAATTTCGGATAAGAAGGAAGAGAAAGA
GAAACACACAGCGATGATAGTGAAGTAAGAAGAAGAAGAAGAAGAGACAGACAGCGTCAATTGATGTAATCTTTGTAGGAAGAAAT
TTCTTCTTCTTCTTGCTTCTGTTCTCTCTC

Annotation (GO term)
GenBank top hits (Blast detail)Scoree value
XP_002876825 pac motif-containing protein [Arabidopsis lyrata subsp. lyrata]16261e-178
NP_565288 protein TWIN LOV 1 [Arabidopsis thaliana]16144e-177
NP_849928 protein TWIN LOV 1 [Arabidopsis thaliana]15912e-174
NP_973401 protein TWIN LOV 1 [Arabidopsis thaliana]13886e-151
XP_002312647 predicted protein [Populus trichocarpa]11351e-121

Swiss-Prot top hits (Blast detail)Scoree value
O64511 Protein TWIN LOV 116141e-178
Q9ST27 Phototropin-23032e-026
P93025 Phototropin-22961e-025
O48963 Phototropin-12905e-025
Q2QYY8 Phototropin-1A2905e-025

TrEMBL top hits (Blast detail)Scoree value
B9HLB4 Predicted protein11358e-122
B9HTE0 Predicted protein11358e-122
D0PPG4 PAS/LOV protein A10703e-114
B9S2C2 Twin lov protein, putative10165e-108
B8ADN0 Putative uncharacterized protein8509e-089

Arabidopsis top hits (Blast detail)Scoree value
AT2G02710.1 PLPB (PAS/LOV PROTEIN B); signal transducer/ two-component sensor16151e-179
AT2G02710.2 PLPB (PAS/LOV PROTEIN B); signal transducer/ two-component sensor15925e-177
AT2G02710.3 PLPB (PAS/LOV PROTEIN B); signal transducer/ two-component sensor13882e-153
AT5G58140.4 PHOT2 (PHOTOTROPIN 2); FMN binding / blue light photoreceptor/ kinase/ protein serine/threonine kinase2969e-027
AT5G58140.2 PHOT2 (PHOTOTROPIN 2); FMN binding / blue light photoreceptor/ kinase/ protein serine/threonine kinase2969e-027

EST library breakdown for ESTs in the assembly
Library ESTsPercentage of ESTs in assembly
 
204  36%
 
191  9%
 
182  18%
 
214  36%

Unigene MembersMember information